Job Description P12295 Confidence 4.67% Date Thu Jan 5 11:33:09 GMT 2012 Rank 82 Aligned Residues 48 % Identity 10% Template c2xu0A_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:erythrocyte membrane protein 1; PDBTitle: crystal structure of the nts-dbl1(alpha-1) domain of the plasmodium2 falciparum membrane protein 1 (pfemp1) from the varo strain. Resolution 2.06 Å

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		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	D	V	F	N	A	F	R	F	T	E	L	G	D	V	K	V	V	I	L	G	Q	D	P	Y	H	G	P	G	Q	A	H	G	L	A	F	S	V	R	P	G	I	A	I	P	P	S	L	L	N	M	Y	K	E	L	E	N	T	I	P
Query Conservation
Alig confidence											.																					.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.																					.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	G	I	C	T	S	L	A	R	.	S	F	A	D	I	G	D	I	V	R	G	R	D	M	F	L	P	N	K	D	.	.	.	.	.	.	.	.	.	.	.	D	K	V	Q	K	G	L	Q	V	V	F	K	K	I	Y	K	S	L	T
Template Known Secondary structure											.											T				B			S	T	T	.	.	.	.	.	.	.	.	.	.	.																		S
Template Predicted Secondary structure											.																					.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		186	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.												.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions