Job Description P12295 Confidence 97.01% Date Thu Jan 5 11:33:09 GMT 2012 Rank 11 Aligned Residues 150 % Identity 10% Template c2rbaB_ PDB info PDB header:hydrolase/dna Chain: B: PDB Molecule:g/t mismatch-specific thymine dna glycosylase; PDBTitle: structure of human thymine dna glycosylase bound to abasic and2 undamaged dna Resolution 2.79 Å

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		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	D	V	K	V	V	I	L	G	Q	D	P	Y	H	G	P	G	Q	A	H	G	L	A	F	S	V	R	P	G	I	A	I	P	P	S	L	L	N	M	Y	K	E	L	E	N	T	I	P	G	F	T	R	P	N	H	G	Y	L	E	S	W	A	R	Q	G	V	L	L	L	N	T	V	L	T	V	R	A	G	Q	A
Query Conservation
Alig confidence																			.													.	.	.	.	.												.	.
Template Conservation																			.													.	.	.	.	.												.	.
Template Sequence		F	N	L	D	I	V	I	I	G	I	N	P	G	L	M	A	A	.	Y	K	G	H	H	Y	P	G	P	G	N	H	.	.	.	.	.	F	W	K	C	L	F	M	S	G	L	S	.	.	E	V	Q	L	N	H	M	D	D	H	T	L	P	G	K	Y	G	I	G	F	T	N	M	V	E	R	T	T	P	G	S	K
Template Known Secondary structure		S	S		S						S								.			T	S	S				S	S	S	S	.	.	.	.	.								T	T	S	S	.	.	S	S				G	G	G	G	G	G												S			S			S	S	G	G
Template Predicted Secondary structure																			.													.	.	.	.	.												.	.
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.		.	.	.	150	.	.	.	.	.	.	.	.						.	160	.	.	.	.	.	.	.	.	.			170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.																		.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	S	H	A	S	L	G	W	E	T	F	T	D	K	V	I	S	L	I	N	Q	H	R	E	G	V	V	F	L	L	W	G	S	H	A	Q	K	K	G	A	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	D	K	Q	R	H	H	V	L	K	A	P	H	P	S	P	L	S	A	H	R	G
Query Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.
Template Sequence		D	L	S	S	K	E	.	F	R	E	G	G	R	I	L	V	Q	K	L	Q	K	Y	Q	P	R	I	A	V	F	N	G	K	C	I	Y	E	I	F	S	K	E	V	F	G	V	K	V	K	N	L	E	F	G	L	Q	P	H	K	I	P	D	T	E	T	L	C	Y	V	M	P	S	S	S	A	R	C	A	Q	F	P
Template Known Secondary structure		G	S					.																		S																		S						S			S								T	T	S										S	S	S	S	S	S	S
Template Predicted Secondary structure								.
Template SS confidence
		202	.	.	.	.	.		.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
		197	.	.	200	.	.			.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure								.	.
Query SS confidence								.	.
Query Sequence		F	F	G	C	N	H	.	.	F	V	L	A	N	Q	W	L	E	Q
Query Conservation								.	.
Alig confidence								.	.
Template Conservation
Template Sequence		R	A	Q	D	K	V	H	Y	Y	I	K	L	K	D	L	R	D	Q
Template Known Secondary structure		S	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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