Return to main results Retrieve Phyre Job Id

Job DescriptionP12295
Confidence6.32%DateThu Jan 5 11:33:09 GMT 2012
Rank63Aligned Residues93
% Identity14%Templatec2i5kB_
PDB info PDB header:transferaseChain: B: PDB Molecule:utp--glucose-1-phosphate uridylyltransferase; PDBTitle: crystal structure of ugp1p
Resolution3.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   18.20.........30..... ....40.........50.........60.........70.........80..... ...
Predicted Secondary structure 


.....

























....

Query SS confidence 

















. . . . .

















































. . . .


Query Sequence  PYFLNTLQTVASERQSGV. . . . . TIYPPQKDVFNAFRFTELGDVKVVILGQDPYHGPGQAHGLAFSVRPGIAI. . . . PPS
Query Conservation   

  
   
        ..... 
 
    

 
    
   










   


 





      ....


Alig confidence 

















.....

















































....


Template Conservation   
   

  
       


 



  
   
   
  

     
  
 
   
                      
 
Template Sequence  DLSVRQIEYLNRQYDSDVPLLLMNSFNTDKDTEHLIKKYSANRIRIRSFNQSRFPRVYKDSLLPVPTEYDSPLDAWYPPG
Template Known Secondary structure  TT




TTTGGGSSSSS





TTT
SB


STTS
GGG


Template Predicted Secondary structure 




































Template SS confidence 















































































   136...140.........150.........160.........170.........180.........190.........200.........210.....
 
   8990.........100.........110.........
Predicted Secondary structure 













Query SS confidence 






























Query Sequence  LLNMYKELENTIPGFTRPNHGYLESWARQGV
Query Conservation 
 

 


         
  
 
  

 


Alig confidence 









.........











Template Conservation 



  

  .........



  
   

Template Sequence  HGDLFESLHV. . . . . . . . . SGELDALIAQGR
Template Known Secondary structure  TTT.........TTTT
Template Predicted Secondary structure 

.........





Template SS confidence 






























   216...220..... ....230.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions