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Job DescriptionP12295
Confidence95.04%DateThu Jan 5 11:33:09 GMT 2012
Rank12Aligned Residues129
% Identity13%Templatec2c2pA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:g/u mismatch-specific dna glycosylase; PDBTitle: the crystal structure of mismatch specific uracil-dna2 glycosylase (mug) from deinococcus radiodurans
Resolution1.75 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   54.....60.........70.........80.........90.........100.........110.........120.........130...
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Query Sequence  GDVKVVILGQDPYHGPGQAHGLAFSVRPGIAIPPSLLNMYKELENTIPGFTRPNHGYLESWARQGVLLLNTVLTVRAGQA
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Template Sequence  PGLTLVLVGTAPSGISA. RARAYYANPENK. . . . . FWRTLHAVGLTPRQLVPQEYATL. . . PQYGLGLTDV. . . AKRHSG
Template Known Secondary structure  TT
SSS

.TSSS
STT

.....TTSSSS


GGGGGGG...GGGTS...
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S
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   24.....30.........40 .........50.. .......60.........70..... ....80..... ....90.
 
   134.....140.........150.........160.........170.........180. ........190.....
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Query Sequence  HSHASLGWETFTDKVISLINQHREGVVFLLWGSHAQKKGAIIDKQRHH. . . . . . . . . . . . . . . VLKAPHPSPLSAHR
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Template Sequence  VDAALPGEAWRPDELRRKVEHYRPRIVAFT. SKRGASETLGVPTGKLPYGPQPQPLDWPAETELWVLPSTSPLGHNH
Template Known Secondary structure 
GGGS
GGG



SS.SSS
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SGGGTTT
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   92.......100.........110.........120. ........130.........140.........150.........160.......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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