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Job DescriptionP12295
Confidence100.00%DateThu Jan 5 11:33:09 GMT 2012
Rank5Aligned Residues225
% Identity55%Templatec2booA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:uracil-dna glycosylase; PDBTitle: the crystal structure of uracil-dna n-glycosylase (ung)2 from deinococcus radiodurans.
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  ANELTWHDVLAEEKQQPYFLNTLQTVASERQSGVTIYPPQKDVFNAFRFTELGDVKVVILGQDPYHGPGQAHGLAFSVRP
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Template Sequence  NLPEDWQEALLPEFSAPYFHELTDFLRQERKEY. TIYPPAPDVFNALRYTPLGEVKVLILGQDPYHGPNQAHGLSFSVRP
Template Known Secondary structure  T

TSS.
S
GGGTTS
GGG

SS


STT

SSSSS


T
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   22.......30.........40.........50.... .....60.........70.........80.........90.........100
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  GIAIPPSLLNMYKELENTIPGFTRPNHGYLESWARQGVLLLNTVLTVRAGQAHSHASLGWETFTDKVISLINQHREGVVF
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Template Sequence  GVRVPPSLRNIYKELTEDIPGFVAPKHGYLRSWAEQGVLLLNAVLTVRAGQANSHQGKGWEHFTDAVIKAVNAKEERVVF
Template Known Secondary structure  TS


STT



SS


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TTBTTTTTTSST
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   101........110.........120.........130.........140.........150.........160.........170.........180
 
   162.......170.........180.........190.........200.........210.........220........
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Query Sequence  LLWGSHAQKKGAIIDKQRHHVLKAPHPSPLSAHRGFFGCNHFVLANQWLEQRGETPIDWMPVLPAES
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Template Sequence  ILWGSYARKKKKLITGKNHVVIESGHPSPLSE. QYFFGTRPFSKTNEALEKAGRGPVEWQLPATVTE
Template Known Secondary structure  SGGGGG


TT


SSTTTG.GGTTT

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   181........190.........200.........210.. .......220.........230.........240......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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