Job Description P0AD19 Confidence 8.09% Date Thu Jan 5 11:19:42 GMT 2012 Rank 11 Aligned Residues 83 % Identity 14% Template c3p5nA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:riboflavin uptake protein; PDBTitle: structure and mechanism of the s component of a bacterial ecf2 transporter Resolution 3.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.			30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50									.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																											.	.																						.	.	.	.	.	.	.	.
Query SS confidence																											.	.																						.	.	.	.	.	.	.	.
Query Sequence		I	W	W	S	L	P	L	T	L	I	V	F	F	A	A	R	K	L	A	A	R	Y	K	F	P	.	.	L	L	N	P	L	L	V	A	M	V	V	I	I	P	F	L	M	L	T	G	I	.	.	.	.	.	.	.	.	S	Y	D	S	Y	F	K	G	S	E	V	L	N	D	L	L	Q	P	A	V	V	A	L	A
Query Conservation																											.	.																						.	.	.	.	.	.	.	.
Alig confidence																											.	.																						.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	F	A	N	F	L	A	G	A	S	F	L	L	T	A	Y	A	I	Y	K	N	K	R	S	T	K	S	L	I	T	G	L	I	I	A	T	I	V	M	T	I	V	L	S	I	L	N	Y	F	V	L	L	P	L	Y	G	M	K	V	I	I	V	S	G	I	I	P	F	N	I	I	K	G	I	V	I	S	I	V	F
Template Known Secondary structure																					S	S	S		S																								T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	P	L	Y	E	Q	L	H	Q	I	R	A	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	L	L	Y	R	R	L	A	N	F	L	K	R
Template Known Secondary structure							T	T					T
Template Predicted Secondary structure
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions