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Job Description | P0AD19 | Confidence | 2.03% | Date | Thu Jan 5 11:19:42 GMT 2012 |
Rank | 53 | Aligned Residues | 99 |
% Identity | 9% | Template | c2f2bA_ |
PDB info |
PDB header:membrane protein | Chain: A: PDB Molecule:aquaporin aqpm; |
PDBTitle: crystal structure of integral membrane protein aquaporin aqpm at 1.68a2 resolution
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Resolution | 1.68 Å |
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Predicted Secondary structure |   |
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Query Sequence |   |
A | N | I | W | W | S | L | P | L | T | L | I | V | F | F | A | A | R | K | L | . |
A | A | R | Y | K | F | P | L | L | N | P | L | L | V | A | M | V | V | I | I | P | F | L | M | L | T | G | I | S | Y | D | S | Y | F | K | G | S | E | V | L | N | D | L | L | Q | P | A | V | V | A | L | A | Y | P | L | Y | E | Q | L |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
Q | A | M | L | A | E | V | V | G | T | F | L | L | M | I | T | I | M | G | I | A | V | D | E | R | A | P | K | G | F | A | G | I | I | I | G | L | T | V | A | G | I | I | T | T | L | G | N | I | S | G | S | S | L | N | P | A | R | T | F | . |
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Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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145 | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | |
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82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
H | Q | I | R | A | R | W | K | S | I | I | T | I | C | F | I | G | S | V | V | A | M | V | T | G | T | S | V |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
D | L | W | N | Y | Y | S | I | Y | V | I | G | P | I | V | G | A | V | L | A | A | L | T | Y | Q | Y | L | T |
Template Known Secondary structure |   |
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| G | G | G | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
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Template SS confidence |   |
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217 | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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