Job Description Q47718 Confidence 98.52% Date Thu Jan 5 12:37:09 GMT 2012 Rank 16 Aligned Residues 72 % Identity 10% Template d1hyva_ SCOP info Ribonuclease H-like motif Ribonuclease H-like Retroviral integrase, catalytic domain Resolution 1.70

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		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	N	Q	V	W	C	G	D	V	T	Y	I	W	T	G	K	R	W	A	Y	L	A	V	V	L	D	L	F	A	R	K	P	V	G	W	A	M	S	F	S	P	D	S	R	L	T	M	K	A	L	E	M	A	W	E	T	R	G	K	P	V	G	V	M	F	Q	A	I	K	A	V	I	I	R	A	G	S	S	G	S
Query Conservation
Alig confidence										.	.	.	.	.																									.																					.						.	.
Template Conservation										.	.	.	.	.																									.																					.						.	.
Template Sequence		S	P	G	I	W	Q	L	D	.	.	.	.	.	T	H	L	E	G	K	V	I	L	V	A	V	H	V	A	S	G	Y	I	E	A	E	V	I	.	P	A	E	T	G	Q	E	T	A	Y	F	L	L	K	L	A	G	R	W	P	.	V	K	T	V	H	.	.	T	D	N	G	S	N	F	T	S	T	T	V	K	A
Template Known Secondary structure			T	T						.	.	.	.	.				T	T									T	T	T									.	S	S																	S		.						.	.		S		G	G	G	G		S
Template Predicted Secondary structure										.	.	.	.	.																									.																					.						.	.
Template SS confidence
		57	.	.	60	.	.	.	.						.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.			.	.	.	.	.	.	120	.	.	.	.	.	.	.
		189
Predicted Secondary structure
Query SS confidence
Query Sequence		Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		129

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions