Job Description Q47718 Confidence 99.47% Date Thu Jan 5 12:37:09 GMT 2012 Rank 3 Aligned Residues 88 % Identity 18% Template d1cxqa_ SCOP info Ribonuclease H-like motif Ribonuclease H-like Retroviral integrase, catalytic domain Resolution 1.02

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		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	E	P	N	Q	V	W	C	G	D	V	T	Y	I	W	T	G	K	R	W	A	Y	L	A	V	V	L	D	L	F	A	R	K	P	V	G	W	A	M	S	F	S	P	D	S	R	L	T	M	K	A	L	E	M	A	W	E	T	R	G	K	P	V	G	V	M	F	Q	A	I	K	A	V	I	I	R	A	G	S	S
Query Conservation
Alig confidence																																									.																											.	.
Template Conservation																																									.																											.	.
Template Sequence		L	G	P	L	Q	I	W	Q	T	D	F	T	L	E	P	R	M	A	P	R	S	W	L	A	V	T	V	D	T	A	S	S	A	I	V	V	T	Q	H	.	G	R	V	T	S	V	A	A	Q	H	H	W	A	T	A	I	A	V	L	G	R	P	K	A	I	K	.	.	T	D	N	G	S	C	F	T	S	K	S	T
Template Known Secondary structure		T	S													G	G	G	T	T	S									T	T	T									.	S	S																					S				.	.			S						S
Template Predicted Secondary structure																																									.																											.	.
Template SS confidence
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.		.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.			120	.	.	.	.	.	.	.	.	.	130	.
		187	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	S	Y	C	G	D	T	G	S	G	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	E	W	L	A	R	W	G	I	A	H
Template Known Secondary structure									T
Template Predicted Secondary structure
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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