Job Description Q47718 Confidence 95.39% Date Thu Jan 5 12:37:09 GMT 2012 Rank 19 Aligned Residues 132 % Identity 14% Template c3v4gA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:arginine repressor; PDBTitle: 1.60 angstrom resolution crystal structure of an arginine repressor2 from vibrio vulnificus cmcp6 Resolution 1.60 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure																																				.
Query SS confidence																																				.
Query Sequence		R	R	A	V	L	R	S	Q	V	L	E	L	H	G	I	S	H	G	S	A	G	A	R	S	I	A	T	M	A	T	R	R	G	Y	.	Q	M	G	R	W	L	A	G	R	L	M	K	E	L	G	L	V	S	C	Q	Q	P	T	H	R	Y	K	R	G	G	H	E	H	V	A	I	P	N	Y	L	E	R	Q	F	A
Query Conservation																																				.
Alig confidence																		.																		.																																	.	.	.	.	.	.	.
Template Conservation																		.																																																			.	.	.	.	.	.	.
Template Sequence		K	Q	D	N	L	V	R	A	F	K	A	L	L	K	E	E	.	R	F	G	S	Q	G	E	I	V	E	A	L	K	Q	E	G	F	E	N	I	N	Q	S	K	V	S	R	M	L	T	K	F	G	A	V	R	T	R	N	A	K	M	E	M	V	Y	C	L	P	T	.	.	.	.	.	.	.	V	S	S	S	L	R
Template Known Secondary structure																	T	.				S											T	T		T	T													T	T							T	T	S									.	.	.	.	.	.	.	T	T			T	G
Template Predicted Secondary structure																		.																																																			.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.								.	.	.	.	.	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.		.	.	130	.	.	.	.	.	.	.	.		.		140	.	.	.	.	.	.	.										.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure																								.												.		.									.	.	.	.	.	.	.	.	.
Query SS confidence																								.												.		.									.	.	.	.	.	.	.	.	.
Query Sequence		V	T	E	P	N	Q	V	W	C	G	D	V	T	Y	I	W	T	G	K	R	W	A	.	Y	L	A	V	V	L	D	L	F	A	R	.	K	.	P	V	G	W	A	M	S	F	.	.	.	.	.	.	.	.	.	S	P	D	S	R	L	T	M	K	A	L	E	M	A	W	E	T	R	G
Query Conservation																								.												.		.									.	.	.	.	.	.	.	.	.
Alig confidence																								.												.		.									.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	L	V	L	D	V	D	H	N	Q	A	L	V	V	I	H	T	G	P	G	A	A	Q	L	I	A	R	M	L	D	S	L	G	K	S	E	G	I	L	G	V	V	A	G	D	D	T	I	F	I	T	P	T	L	T	I	T	T	E	Q	L	F	K	S	V	C	E	L	F	E	Y	A	G
Template Known Secondary structure		G	G								S	S							S	T	T														G	G	G	T								S	S								T	T	S														T
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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