Job Description Q47718 Confidence 92.10% Date Thu Jan 5 12:37:09 GMT 2012 Rank 23 Aligned Residues 124 % Identity 17% Template c3ereD_ PDB info PDB header:dna binding protein/dna Chain: D: PDB Molecule:arginine repressor; PDBTitle: crystal structure of the arginine repressor protein from mycobacterium2 tuberculosis in complex with the dna operator Resolution 2.50 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Query SS confidence																																																																										.	.	.	.	.	.	.	.
Query Sequence		E	K	P	D	G	R	R	A	V	L	R	S	Q	V	L	E	L	H	G	I	S	H	G	S	A	G	A	R	S	I	A	T	M	A	T	R	R	G	Y	Q	M	G	R	W	L	A	G	R	L	M	K	E	L	G	L	V	S	C	Q	Q	P	T	H	R	Y	K	R	G	G	H	E	H	.	.	.	.	.	.	.	.
Query Conservation																																																																										.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.																																																				.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.
Template Sequence		A	N	R	A	G	R	Q	A	R	I	V	A	I	L	S	S	.	.	.	.	.	A	Q	V	R	S	Q	N	E	L	A	A	L	L	A	A	E	G	I	E	V	T	Q	A	T	L	S	R	D	L	E	E	L	G	A	V	K	L	R	G	A	D	G	G	T	G	I	Y	V	V	P	E	D	G	S	P	V	R	G	V
Template Known Secondary structure																	T	.	.	.	.	.					S											T	T														T	T	T							T	T	S	S										S						T
Template Predicted Secondary structure																		.	.	.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.						.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.		.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure																																				.
Query SS confidence																																				.
Query Sequence		V	A	I	P	N	Y	L	E	R	Q	F	A	V	T	E	P	N	Q	V	W	C	G	D	V	T	Y	I	W	T	G	K	R	W	A	.	Y	L	A	V	V	L	D	L	F	A	R	K	P	V	G	W	A	M	S	F	S	P	D
Query Conservation																																				.
Alig confidence																																				.
Template Conservation
Template Sequence		S	G	G	T	D	R	M	A	R	L	L	G	E	L	L	V	S	T	D	D	S	G	N	L	A	V	L	R	T	P	P	G	A	A	H	Y	L	A	S	A	I	D	R	A	A	L	P	Q	V	V	G	T	I	A	G	D	D	T
Template Known Secondary structure		T	T	T																			T	T							S	T	T	T											T	T		T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions