Job Description Q47718 Confidence 98.55% Date Thu Jan 5 12:37:09 GMT 2012 Rank 15 Aligned Residues 84 % Identity 14% Template c3dlrA_ PDB info PDB header:transferase Chain: A: PDB Molecule:integrase; PDBTitle: crystal structure of the catalytic core domain from pfv2 integrase Resolution 2.20 Å

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		107	.	.	110	.	.	.	.	.	.		.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		T	E	P	N	Q	V	W	C	G	D	.	V	T	Y	I	W	T	G	K	R	W	A	Y	L	A	V	V	L	D	L	F	A	R	K	P	V	G	W	A	M	S	F	S	P	D	S	R	L	T	M	K	A	L	E	M	A	W	E	T	R	G	K	P	V	G	V	M	F	Q	A	I	K	A	V	I	I	R	A	G	S
Query Conservation												.
Alig confidence												.																																	.										.											.	.
Template Conservation																																													.										.											.	.
Template Sequence		Q	K	P	F	D	K	F	F	I	D	Y	I	G	P	L	P	P	S	Q	G	Y	L	Y	V	L	V	V	V	D	G	X	T	G	F	T	W	L	Y	P	T	K	A	P	.	S	T	S	A	T	V	K	S	L	.	N	V	L	T	S	I	A	I	P	K	.	.	V	I	H	S	D	Q	G	A	A	F	T	S	S	T
Template Known Secondary structure				T	T	S											S		B	T	T	B									T	T	T									S	S	S	.										.				T	T	T				S	.	.						S						S
Template Predicted Secondary structure																																													.										.											.	.
Template SS confidence
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.		.	.	.	.	.	.	.	.	170		.	.	.	.	.	.	.	.	.	180			.	.	.	.	.	.	.	.	.	190	.	.	.	.
		186	.	.	.	190	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	S	Y	C	G	D	T	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	A	E	W	A	K	E	R	G
Template Known Secondary structure										T
Template Predicted Secondary structure
Template SS confidence
		195	.	.	.	.	200	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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