Job Description Q47718 Confidence 7.20% Date Thu Jan 5 12:37:09 GMT 2012 Rank 86 Aligned Residues 91 % Identity 13% Template c2k27A_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:paired box protein pax-8; PDBTitle: solution structure of human pax8 paired box domain Resolution UNK

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.														.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60						.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.
Query Sequence		K	E	C	P	L	N	S	G	Y	L	R	K	N	R	P	.	.	.	.	.	.	.	.	.	.	.	.	.	E	K	P	D	G	R	R	A	V	L	R	S	Q	V	L	E	L	H	G	I	S	H	G	S	A	G	A	R	S	I	A	T	M	A	T	R	R	G	Y	.	.	.	.	.	Q	M	G	R	W	L	A	G
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.																						.																		.	.	.	.	.
Template Conservation																																																			.
Template Sequence		L	R	V	S	H	G	C	V	S	K	I	L	G	R	Y	Y	E	T	G	S	I	R	P	G	V	I	G	G	S	K	P	K	V	A	T	P	K	V	V	E	K	I	G	D	Y	K	R	Q	N	.	P	T	M	F	A	W	E	I	R	D	R	L	L	A	E	G	V	C	D	N	D	T	V	P	S	V	S	S	I	N
Template Known Secondary structure			T			S										S	S	T	T	S																	T	T													.	S	S	S													T		S		T	T	T	S
Template Predicted Secondary structure																																																			.
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	M	K	E	L	G	L	V	S	C	Q	Q	P	T	H	R	Y	K	R	G	G	H	E	H	V	A	I	P	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	I	I	R	T	K	V	Q	Q	P	F	N	L	P	M	D	S	G	A	P	G	G	G	S	H	H	H	H	H	H
Template Known Secondary structure								S				S
Template Predicted Secondary structure
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions