Job Description Q47718 Confidence 99.55% Date Thu Jan 5 12:37:09 GMT 2012 Rank 1 Aligned Residues 86 % Identity 19% Template c1c0mA_ PDB info PDB header:transferase Chain: A: PDB Molecule:protein (integrase); PDBTitle: crystal structure of rsv two-domain integrase Resolution 2.53 Å

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		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	E	P	N	Q	V	W	C	G	D	V	T	Y	I	W	T	G	K	R	W	A	Y	L	A	V	V	L	D	L	F	A	R	K	P	V	G	W	A	M	S	F	S	P	D	S	R	L	T	M	K	A	L	E	M	A	W	E	T	R	G	K	P	V	G	V	M	F	Q	A	I	K	A	V	I	I	R	A	G	S
Query Conservation
Alig confidence																																											.																							.	.
Template Conservation																																											.																							.	.
Template Sequence		G	L	G	P	L	Q	I	W	Q	T	D	F	T	L	E	P	R	M	A	P	R	S	W	L	A	V	T	V	D	T	A	S	S	A	I	V	V	T	Q	H	G	.	R	V	T	S	V	A	V	Q	H	H	W	A	T	A	I	A	V	L	G	R	P	K	.	.	A	I	K	T	D	N	G	S	C	F	T	S	K	S
Template Known Secondary structure			S	S	T	T	S										G	G	G		S	S									T	T	T									S	.	S																					S	.	.						S						S
Template Predicted Secondary structure																																											.																							.	.
Template SS confidence
		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.		.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.			.	.	.	120	.	.	.	.	.	.	.	.	.	130
		186	.	.	.	190	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	S	Y	C	G	D	T	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	R	E	W	L	A	R	W	G
Template Known Secondary structure										T
Template Predicted Secondary structure
Template SS confidence
		131	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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