 |
Job Description | P77378 | Confidence | 69.55% | Date | Thu Jan 5 12:28:21 GMT 2012 |
Rank | 87 | Aligned Residues | 89 |
% Identity | 12% | Template | d1m1na_ |
SCOP info | Chelatase-like
| "Helical backbone" metal receptor
| Nitrogenase iron-molybdenum protein
|
Resolution | 1.16 |
|
 |
  |   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | |
|
|
. | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
| . | . | . |
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | S | V | W | V | F | S | D | N | P | E | R | Y | A | E | L | F | G | G | A | Q | Q | W | G | Q | Q | V | Y | A | I | V | Q | N | . |
. |
. |
T | D | Q | A | Q | A | V | M | P | Y | G | P | K | C | L | Y | V | L | A | Q | N | D | A | L | Q | R | T | E | N | Y | A | E | S | I | A | A | L | L | K | D | K | H | P | A |
Query Conservation |   |
  |   |
|   |
|   |
|
|   |   |   |   |   |   |
|
|
|   |   |
|   |   |
|
|   |   |
|   |
|
|
|   |
| . | . | . |   |   |   |
|   |   |   |   |   |   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |   |
|   |   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |
|   |   | . |   |   |   |   |   |   |   |
|
|   |   |
|   |
|
|
|
|   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|   |   |
| . | . | . | . | . | . | . | . |
|   |   |   |
|   |   |   |   |
|
|
Template Sequence |   |
K | R | V | M | L | Y | I | . |
G | G | L | R | P | R | H | V | I | G | A | Y | E | D | L | G | M | E | V | V | G | T | G | Y | E | F | A | H | N | D | D | Y | D | R | T | M | K | E | M | G | D | S | T | L | L | Y | D | D | V | T | G | Y | E | . |
. |
. |
. |
. |
. |
. |
. |
F | E | E | F | V | K | R | I | K | P | D |
Template Known Secondary structure |   |
|  |  |  |  |
| B | . | S | S | S |  |  |  |  | T |  |  |  |  |  | T | T | T |
|  |  |  |  |  |  |  | S | S |
|
|  |  |  |  |  | T | T | T | T | T | S |
| T | T |
|  |  |  |  | S |
| B |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
| S |
Template Predicted Secondary structure |   |
|  |  |  |  |  |
| . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
349 | 350 | . | . | . | . | . | |
. | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
. | 410 | . | . | . | . | . | . | . | . | . |
  |
  |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | L | L | L | A | A | T | K | R | G | K | A | L | A | A | R | L | S | V | Q | L | N | A | A | L | V | N |
Query Conservation |   |
  |
|
|   |   |   |
|   |   |
|
|   |
|
|   |
|
|
|
|   |
|   |   |   |   |
|
|
Alig confidence |   |
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
| . | . | . | . | . | . |
|   |   |   |   |   |   |   |
|   |
|   |
|
|
|   |
|   |
Template Sequence |   |
L | I | G | . |
. |
. |
. |
. |
. |
S | G | I | K | E | K | F | I | F | Q | K | M | G | I | P | F | R | E |
Template Known Secondary structure |   |
 |  |  | . | . | . | . | . | . |  |
|  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |
Template Predicted Secondary structure |   |
 |  |  | . | . | . | . | . | . |  |
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
420 | . | . | |
|
|
|
|
|
. | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|