Job Description P77378 Confidence 100.00% Date Thu Jan 5 12:28:21 GMT 2012 Rank 7 Aligned Residues 165 % Identity 22% Template c3ih5A_ PDB info PDB header:electron transport Chain: A: PDB Molecule:electron transfer flavoprotein alpha-subunit; PDBTitle: crystal structure of electron transfer flavoprotein alpha-2 subunit from bacteroides thetaiotaomicron Resolution 2.60 Å

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		5	.	.	.	.	10	.	.	.	.	.	.						.	.	.	20	.	.	.	.	.	.	.					.	.	30	.	.	.	.	.	.	.	.	.	40				.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.
Predicted Secondary structure														.	.	.	.	.												.	.	.	.														.	.	.																								.
Query SS confidence														.	.	.	.	.												.	.	.	.														.	.	.																								.
Query Sequence		N	S	V	W	V	F	S	D	N	P	E	R	.	.	.	.	.	Y	A	E	L	F	G	G	A	Q	Q	W	.	.	.	.	G	Q	Q	V	Y	A	I	V	Q	N	T	D	Q	.	.	.	A	Q	A	V	M	P	Y	G	P	K	C	L	Y	V	L	A	Q	N	D	A	L	Q	R	.	T	E	N	Y	A	E	S	I
Query Conservation														.	.	.	.	.												.	.	.	.														.	.	.																								.
Alig confidence														.	.	.	.	.												.	.	.	.														.	.	.																								.
Template Conservation
Template Sequence		N	N	L	F	V	Y	C	E	I	E	E	G	I	V	A	D	V	S	L	E	L	L	T	K	G	R	S	L	A	N	E	L	N	C	Q	L	E	A	V	V	A	G	T	G	L	K	E	I	E	K	Q	I	L	P	Y	G	V	D	K	L	H	V	F	D	A	E	G	L	Y	P	Y	T	S	L	P	H	T	S	I	L
Template Known Secondary structure												T	T																					T										S			T	T	T					G	G	G	T		S								G	G	G	S	S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.												120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.		.	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.																			.
Query SS confidence																																																		.	.	.	.	.	.	.	.	.	.	.																			.
Query Sequence		A	A	L	L	K	D	K	H	P	A	M	L	L	L	A	A	T	K	R	G	K	A	L	A	A	R	L	S	V	Q	L	N	A	A	L	V	N	D	A	T	A	V	D	I	V	D	G	H	.	.	.	.	.	.	.	.	.	.	.	I	C	A	E	H	R	M	Y	G	G	L	A	F	A	Q	E	K	I	.	N	S
Query Conservation																																																		.	.	.	.	.	.	.	.	.	.	.																			.
Alig confidence																																																		.	.	.	.	.	.	.	.	.	.	.																			.
Template Conservation
Template Sequence		V	N	L	F	K	E	E	Q	P	Q	I	C	L	X	G	A	T	V	I	G	R	D	L	G	P	R	V	S	S	A	L	T	S	G	L	T	A	D	C	T	S	L	E	I	G	D	H	E	D	K	K	E	G	K	V	Y	K	N	L	L	Y	Q	I	R	P	A	F	G	G	N	I	V	A	T	I	V	N	P	E	H
Template Known Secondary structure											S							S														T	T				B		S		S										T	T	T	T													S	S	S	S	S								S	S	S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	A	I	I	T	L	A	P	G	V	Q	E	P	C	T	S	D	T	S	H	Q	C	P	T	E	T	V	P	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	P	Q	X	A	T	V	R	E	G	V	X	K	K	E	I	V	S	P	A	Y	Q	G	E	V	I	R	H	D	V
Template Known Secondary structure		S	S							T	T	S	S					S		T	T
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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