Job Description P77378 Confidence 86.97% Date Thu Jan 5 12:28:21 GMT 2012 Rank 69 Aligned Residues 112 % Identity 21% Template c2vbgB_ PDB info PDB header:lyase Chain: B: PDB Molecule:branched-chain alpha-ketoacid decarboxylase; PDBTitle: the complex structure of the branched-chain keto acid2 decarboxylase (kdca) from lactococcus lactis with 2r-1-3 hydroxyethyl-deazathdp Resolution 1.80 Å

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		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.							.	.	.	.	.	.	.	.	250	.							.	.	.	.	.	.	.	.	260
Predicted Secondary structure																																																	.	.	.	.	.	.											.	.	.	.	.	.										.	.
Query SS confidence																																																	.	.	.	.	.	.											.	.	.	.	.	.										.	.
Query Sequence		K	R	V	V	G	V	G	R	G	L	A	A	Q	D	D	L	K	M	V	H	E	L	A	A	V	L	N	A	E	V	G	C	S	R	P	I	A	E	G	E	N	W	M	E	R	E	R	.	.	.	.	.	.	Y	I	G	V	S	G	V	L	L	K	.	.	.	.	.	.	S	D	L	Y	L	T	L	G	I	.	.
Query Conservation																																																	.	.	.	.	.	.											.	.	.	.	.	.										.	.
Alig confidence																																					.	.	.										.	.	.	.	.	.											.	.	.	.	.	.										.	.
Template Conservation																																					.	.	.
Template Sequence		K	P	V	V	I	A	G	H	E	V	I	S	F	G	L	E	K	T	V	T	Q	F	V	S	E	T	K	L	P	I	T	T	L	N	F	.	.	.	G	K	S	A	V	D	E	S	L	P	S	F	L	G	I	Y	N	G	K	L	S	E	I	S	L	K	N	F	V	E	S	A	D	F	I	L	M	L	G	V	K	L
Template Known Secondary structure		S												T	T													T							S	T	.	.	.	T	T	T	S	S		T	T	S	T	T							G	G	G	S												S						S
Template Predicted Secondary structure																																					.	.	.
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.				.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
			261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	S	G	Q	I	Q	H	M	V	G	G	N	G	A	K	V	I	V	A	I	N	K	D	K	N	A	P	I	F	N	Y	A	D	Y	G	L	V	G	D	I	Y	K	V	V	P	A	L	I	S	Q	L	S	R
Query Conservation		.
Alig confidence		.																									.						.	.
Template Conservation																											.						.	.
Template Sequence		T	D	S	S	T	G	A	F	T	H	H	L	D	E	N	K	M	I	S	L	N	I	D	E	G	.	I	I	F	N	K	.	.	V	V	E	D	F	D	F	R	A	V	V	S	S	L	S	E	L	K	G	I
Template Known Secondary structure			G	G	G	T	T	T	T						G	G	G						S	S			.			T	T		.	.				S	S							T	T	G	G	G			S
Template Predicted Secondary structure																											.						.	.
Template SS confidence
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.		.	310	.	.	.			.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions