Job Description P77378 Confidence 22.75% Date Thu Jan 5 12:28:21 GMT 2012 Rank 167 Aligned Residues 92 % Identity 8% Template c2pfsA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:universal stress protein; PDBTitle: crystal structure of universal stress protein from nitrosomonas2 europaea Resolution 2.25 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.					.	.	30	.	.	.	.	.	.	.																								.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	N	S	V	W	V	F	S	D	N	P	E	R	Y	A	E	L	F	G	G	A	Q	Q	W	.	.	.	.	G	Q	Q	V	Y	A	I	V	Q	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	D	Q	A	Q	A	V	M	P	Y	G	P	K	C	L	Y	V	L	A
Query Conservation																										.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	H	H	I	L	L	A	V	D	F	S	S	E	D	S	Q	V	V	Q	K	V	R	N	L	A	S	Q	I	G	A	R	L	S	L	I	H	V	L	D	T	A	I	P	L	D	T	E	T	T	Y	D	A	X	L	D	V	E	K	Q	K	L	S	Q	I	G	N	T	L	G	I	D	P	A	H	R	W	L	V	W	G
Template Known Secondary structure			S										T	T																T															S	S	S																							T			G	G	G						S
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	N	D	A	L	Q	R	T	E	N	Y	A	E	S	I	A	A	L	L	K	D	K	H	P	A	M	L	L	L	A	A	T	K	R	G	K	A	L	A	A	R	L	S	V	Q	L	N	A	A	L	V	N
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.																					.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.																					.	.	.	.
Template Sequence		E	P	.	.	.	.	.	.	.	.	.	R	E	E	I	I	R	I	A	E	Q	E	N	V	D	L	I	V	V	G	S	.	.	.	.	H	S	T	A	N	S	V	L	H	Y	A	K	C	D	V	L	A
Template Known Secondary structure				.	.	.	.	.	.	.	.	.											T	T		S							.	.	.	.												S	S
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.																					.	.	.	.
Template SS confidence
		94	.										.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.					.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions