Return to main results Retrieve Phyre Job Id

Job DescriptionP17846
Confidence21.80%DateThu Jan 5 11:36:18 GMT 2012
Rank77Aligned Residues83
% Identity19%Templated1z91a1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators
Resolution2.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   91........100.........110.........120.........130.........140.........150.........160.........170
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Query Sequence  ITTKQWQAIDKFAGENTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEA
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Template Sequence  ITYPQYLALLLLW. EH. . ETL. . . TVKKMGEQLYLDSGTLTPMLKRMEQQGLITRKRSEEDERSVLISLTEDGALLKEKA
Template Known Secondary structure 

...S...TTT

TS

B
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TTSB
SGGGGT
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   38.40.........50 .. ... ....60.........70.........80.........90.........100.........110.
 
   171........
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Query Sequence  YEWAKKISE
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Template Conservation           
Template Sequence  VDIPGTILG
Template Known Secondary structure  TT
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   112.......120
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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