Job Description P17846 Confidence 99.68% Date Thu Jan 5 11:36:18 GMT 2012 Rank 26 Aligned Residues 146 % Identity 22% Template c3noyA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; PDBTitle: crystal structure of ispg (gcpe) Resolution 2.70 Å

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		367	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.																												.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	L	D	Y	P	A	R	P	L	K	T	G	L	L	E	I	A	K	I	H	K	G	D	F	R	I	T	A	N	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	L	I	I	A	G	V	P	E	S	E	K	A	K	I	E	K	I	A	K	E	S	G
Query Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	K	G	S	D	V	L	Q	N	V	R	A	N	L	I	F	A	E	R	T	D	V	P	L	H	I	G	I	T	E	A	G	M	G	T	K	G	I	I	K	S	S	V	G	I	G	I	L	L	Y	M	G	I	G	D	T	V	R	V	S	L	T	D	D	P	V	V	E	V	E	T	A	Y	E	I	L	K	S	L	G
Template Known Secondary structure					S	S																								S	S			S																		T	T			S							S	S																T	T
Template Predicted Secondary structure
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480		.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																															.
Query SS confidence																																																															.
Query Sequence		L	M	N	A	V	T	P	Q	R	E	N	S	M	A	C	V	S	F	P	T	C	P	L	A	M	A	E	A	E	R	F	L	P	S	F	I	D	N	I	D	N	L	M	A	K	H	G	V	S	D	E	H	I	V	M	R	V	T	G	C	P	.	N	G	C	G	R	A	M	L	A	E	V	G	L	V	G	K	A	P
Query Conservation																																																															.
Alig confidence								.	.	.	.						.	.	.																									.	.	.	.	.	.	.													.																.
Template Conservation								.	.	.	.						.	.	.																									.	.	.	.	.	.	.																													.
Template Sequence		L	R	R	R	G	V	.	.	.	.	E	I	V	A	C	.	.	.	P	T	C	G	R	I	E	V	D	L	P	K	V	V	K	E	V	Q	E	K	L	S	G	V	.	.	.	.	.	.	.	K	T	P	L	K	V	A	V	M	G	C	V	V	N	A	I	G	E	A	R	E	A	D	I	G	L	A	C	.	G	R
Template Known Secondary structure		S			S	S		.	.	.	.						.	.	.				T	T			S													T	T	T		.	.	.	.	.	.	.		S								S	S	S							T	T	T		S						.		S
Template Predicted Secondary structure								.	.	.	.						.	.	.																									.	.	.	.	.	.	.																													.
Template SS confidence
		255	.	.	.	.	260					.	.	.	.	.				.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.								290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.		.	.
		499	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	Y	N	L	H	L	G	G	N	R	I	G	T	R	I	P	R	M	Y	K	E	N	I	T	E	P	E	I	L	A	S	L	D	E	L	I	G
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.
Template Sequence		G	F	A	W	L	F	K	H	G	K	.	.	.	.	.	.	.	.	.	P	I	K	K	V	D	E	S	E	M	V	D	E	L	L	K	E	I	Q
Template Known Secondary structure		S							T	T		.	.	.	.	.	.	.	.	.							S
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.
Template SS confidence
		320	.	.	.	.	.	.	.	.	.										330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions