Job Description P17846 Confidence 36.79% Date Thu Jan 5 11:36:18 GMT 2012 Rank 52 Aligned Residues 99 % Identity 15% Template c3ereD_ PDB info PDB header:dna binding protein/dna Chain: D: PDB Molecule:arginine repressor; PDBTitle: crystal structure of the arginine repressor protein from mycobacterium2 tuberculosis in complex with the dna operator Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.				.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.
Predicted Secondary structure																						.	.	.
Query SS confidence																						.	.	.
Query Sequence		V	K	G	I	D	D	N	W	H	L	T	L	F	I	E	N	G	R	I	L	.	.	.	D	Y	P	A	R	P	L	K	T	G	L	L	E	I	A	K	I	H	K	G	D	F	R	I	T	A	N	Q	N	L	I	I	A	G	V	P	E	S	E	K	A	K	I	E	K	I	A	K	E	S	G	L	M	N	A	V	T
Query Conservation																						.	.	.
Alig confidence																						.	.	.															.	.	.	.	.	.																																			.	.	.
Template Conservation																																							.	.	.	.	.	.																																			.	.	.
Template Sequence		L	R	G	A	D	G	G	T	G	I	Y	V	V	P	E	D	G	S	P	V	R	G	V	S	G	G	T	D	R	M	A	R	L	L	G	E	L	.	.	.	.	.	.	L	V	S	T	D	D	S	G	N	L	A	V	L	R	T	P	P	G	A	A	H	Y	L	A	S	A	I	D	R	A	A	L	P	Q	.	.	.
Template Known Secondary structure					T	T	S	S										S						T	T	T	T												.	.	.	.	.	.								T	T							S	T	T	T											T	T		T	T	.	.	.
Template Predicted Secondary structure																																							.	.	.	.	.	.																																			.	.	.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.							.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
		426	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Q	R	E	N	S	M	A	C	V	S	F	P	T	C	P	L	A	M	A	E	A	E	R	F	L	P	S	F	I	D	N	I	D	N	L
Query Conservation
Alig confidence		.	.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	V	V	G	T	I	A	G	D	D	T	I	L	V	V	A	R	E	P	T	T	G	A	Q	L	A	G	M	F	E	N	L
Template Known Secondary structure		.	.	.	.	.								S	S								T	T												T	T
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions