Job Description P17846 Confidence 100.00% Date Thu Jan 5 11:36:18 GMT 2012 Rank 5 Aligned Residues 271 % Identity 17% Template c2v4jE_ PDB info PDB header:oxidoreductase Chain: E: PDB Molecule:sulfite reductase, dissimilatory-type subunit PDBTitle: the crystal structure of desulfovibrio vulgaris2 dissimilatory sulfite reductase bound to dsrc provides3 novel insights into the mechanism of sulfate respiration Resolution 2.10 Å

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		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.								.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.																																.
Query SS confidence																				.	.	.	.	.	.	.																																.
Query Sequence		D	G	L	T	G	G	F	K	G	D	N	F	L	L	I	R	F	H	.	.	.	.	.	.	.	G	M	Y	Q	Q	D	D	R	D	I	R	A	E	R	A	E	Q	K	L	E	P	R	H	A	M	L	L	R	C	R	L	.	P	G	G	V	I	T	T	K	Q	W	Q	A	I	D	K	F	A	G	E	N	T	I	Y
Query Conservation																				.	.	.	.	.	.	.																																.
Alig confidence																				.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.										.																				.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Template Sequence		K	F	D	E	F	F	P	P	V	I	A	K	N	F	G	S	W	L	Y	H	E	I	L	E	P	G	V	L	M	H	V	A	E	S	.	.	.	.	.	.	.	.	.	.	.	.	.	G	D	K	V	Y	T	V	R	V	G	A	A	R	L	M	S	I	T	H	I	R	E	M	C	D	I	A	D	K	.	Y	C	G
Template Known Secondary structure			T	T	T	T									T	T										T	T							T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	S												S	S																.		S	T
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.														.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.		.	.	90
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.							.	.	.	.	.	150	.	.	.	.	.	.	.	.	.		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure																																					.	.	.	.	.	.																.
Query SS confidence																																					.	.	.	.	.	.																.
Query Sequence		G	S	I	R	L	T	N	R	Q	T	F	Q	F	H	G	I	L	K	K	N	V	K	P	V	H	Q	M	L	H	S	V	G	L	D	A	.	.	.	.	.	.	L	A	T	A	N	D	M	N	R	N	V	L	C	T	S	.	N	P	Y	E	S	Q	L	H	A	E	A	Y	E	W	A	K	K	I	S	E	H	L	L
Query Conservation																																					.	.	.	.	.	.																.
Alig confidence																																					.	.	.	.	.	.																.
Template Conservation
Template Sequence		G	H	L	R	F	T	T	R	N	N	V	E	F	M	V	A	D	E	A	S	L	K	A	L	K	E	D	L	A	S	R	K	F	D	G	G	S	L	K	F	P	I	G	G	T	G	A	G	V	S	N	I	V	H	T	Q	G	W	V	H	C	H	T	P	A	T	D	A	S	G	P	V	K	A	I	M	D	E	V	F
Template Known Secondary structure		T						T	T	S							S	S															B		T	T	S		B	S	S		B				S	S	S	B				B				G	G	G	T		S	S		S	S		S
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	R	T	R	A	Y	A	E	I	W	L	D	Q	E	K	V	A	T	T	D	E	E	P	I	L	G	Q	T	Y	L	P	R	K	F	K	T	T	V	V	I	P	P	Q	N	D	I	D	L	H	A	N	D	M	N	F	V	A	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	Q	S	M	R	L	P	A	P	V	R	I	S	L	A	C	C	I	N	M	C	G	A	V	H	C	S	D	I	G	V	V	G	I	H	R	K	P	P	M	I	D	H	E	W	T	D	Q	L	C	E	I	P	L	A	V
Template Known Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S				S	S	S		B						S	S	T	T			S	S	G	G	G	S	S									S
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		171	.																							.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
																																														241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	N	G	K	L	V	G	F	N	L	L	V	G	G	G	L	S	I	E	H	G	N	K	K	T	Y	A	R	T	A	S	E	F	G	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.
Template Conservation
Template Sequence		A	S	C	P	T	A	A	V	R	P	T	K	L	E	I	G	D	K	K	V	N	T	I	A	I	K	N	E	R	C	M	Y	C	G	N	C	Y	T	M	C	P	A	L	P	I	S	D	G	E	G	D	G	V	V	I	M	V	G	G	K	V	S	N	R	I	S	M	P	K	F	S	K	V	V	V	A	Y	I	P	N
Template Known Secondary structure			T		T	T											T	T										G	G	G												T	T						T	T	T										B				S	S	S			B
Template Predicted Secondary structure
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
			276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330		.	.	.	.	.	.	.	.	.	340			.	.	.	.	.	.	.	.
Predicted Secondary structure		.																																																								.											.	.
Query SS confidence		.																																																								.											.	.
Query Sequence		.	Y	L	P	L	E	H	T	L	A	V	A	E	A	V	V	T	T	Q	R	D	W	G	N	R	T	D	R	K	N	A	K	T	K	Y	T	L	E	R	V	G	V	E	T	F	K	A	E	V	E	R	R	A	G	I	K	.	F	E	P	I	R	P	Y	E	F	T	.	.	G	R	G	D	R	I	G	W
Query Conservation		.																																																								.											.	.
Alig confidence		.																							.	.	.	.																														.											.	.
Template Conservation																									.	.	.	.
Template Sequence		E	P	P	R	W	P	S	L	T	K	T	I	K	H	I	I	E	V	Y	S	A	N	A	.	.	.	.	Y	K	Y	E	R	L	G	E	W	A	E	R	I	G	W	E	R	F	F	S	L	T	G	L	E	F	S	H	H	L	I	D	D	F	R	D	P	A	Y	Y	T	W	R	Q	S	T	Q	F	K	F
Template Known Secondary structure			T	T	T																				.	.	.	.		T	T																				T					G	G	G	S			S	T	G	G	G	G	G	G	S			S	S
Template Predicted Secondary structure																									.	.	.	.
Template SS confidence
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.					.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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