Email l.a.kelley@imperial.ac.uk Description P45767 Date Thu Jan 5 12:03:42 GMT 2012 Unique Job ID 86deb16a2ca29c8c

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d3dhwa1 99.9 27 Fold:MetI-like Superfamily:MetI-like Family:MetI-like 2 c2onkC_ 99.9 14 PDB header:membrane protein Chain: C: PDB Molecule:molybdate/tungstate abc transporter, permease PDBTitle: abc transporter modbc in complex with its binding protein2 moda 3 d2onkc1 99.9 14 Fold:MetI-like Superfamily:MetI-like Family:MetI-like 4 d2r6gf2 99.8 18 Fold:MetI-like Superfamily:MetI-like Family:MetI-like 5 d3d31c1 99.8 21 Fold:MetI-like Superfamily:MetI-like Family:MetI-like 6 c3d31D_ 99.8 21 PDB header:transport protein Chain: D: PDB Molecule:sulfate/molybdate abc transporter, permease PDBTitle: modbc from methanosarcina acetivorans 7 c3fh6F_ 99.8 14 PDB header:transport protein Chain: F: PDB Molecule:maltose transport system permease protein malf; PDBTitle: crystal structure of the resting state maltose transporter from e.2 coli 8 c2r6gF_ 99.8 16 PDB header:hydrolase/transport protein Chain: F: PDB Molecule:maltose transport system permease protein malf; PDBTitle: the crystal structure of the e. coli maltose transporter 9 d2r6gg1 99.7 17 Fold:MetI-like Superfamily:MetI-like Family:MetI-like 10 d1umqa_ 67.6 22 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:FIS-like 11 c1umqA_ 67.6 22 PDB header:dna-binding protein Chain: A: PDB Molecule:photosynthetic apparatus regulatory protein; PDBTitle: solution structure and dna binding of the effector domain2 from the global regulator prra(rega) from r. sphaeroides:3 insights into dna binding specificity 12 d1ntca_ 64.7 19 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:FIS-like 13 d1fipa_ 64.7 16 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:FIS-like 14 d1etob_ 63.2 16 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:FIS-like 15 c3e7lD_ 61.0 16 PDB header:transcription regulator Chain: D: PDB Molecule:transcriptional regulator (ntrc family); PDBTitle: crystal structure of sigma54 activator ntrc4's dna binding2 domain 16 d1etxa_ 55.5 13 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:FIS-like 17 d1g2ha_ 42.6 13 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:FIS-like 18 c2cw1A_ 35.6 47 PDB header:de novo protein Chain: A: PDB Molecule:sn4m; PDBTitle: solution structure of the de novo-designed lambda cro fold2 protein 19 c2auwB_ 24.4 16 PDB header:unknown function Chain: B: PDB Molecule:hypothetical protein ne0471; PDBTitle: crystal structure of putative dna binding protein ne0471 from2 nitrosomonas europaea atcc 19718 20 d1igna2 18.5 20 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:DNA-binding domain of rap1 21 c2h51B_ not modelled 18.3 22 PDB header:hydrolase/hydrolase inhibitor Chain: B: PDB Molecule:caspase-1; PDBTitle: crystal structure of human caspase-1 (glu390->asp and arg286->lys) in2 complex with 3-[2-(2-benzyloxycarbonylamino-3-methyl-butyrylamino)-3 propionylamino]-4-oxo-pentanoic acid (z-vad-fmk) 22 d2auwa1 not modelled 16.0 27 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:NE0471 C-terminal domain-like 23 d3orca_ not modelled 15.6 29 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:Phage repressors 24 d1puca_ not modelled 14.4 40 Fold:Cell cycle regulatory proteins Superfamily:Cell cycle regulatory proteins Family:Cell cycle regulatory proteins 25 c1qb3B_ not modelled 14.1 40 PDB header:cell cycle Chain: B: PDB Molecule:cyclin-dependent kinases regulatory subunit; PDBTitle: crystal structure of the cell cycle regulatory protein cks1 26 c2d7dB_ not modelled 13.4 21 PDB header:hydrolase/dna Chain: B: PDB Molecule:40-mer from uvrabc system protein b; PDBTitle: structural insights into the cryptic dna dependent atp-ase2 activity of uvrb 27 d1a8ra_ not modelled 12.1 24 Fold:T-fold Superfamily:Tetrahydrobiopterin biosynthesis enzymes-like Family:GTP cyclohydrolase I 28 c1is7F_ not modelled 12.0 35 PDB header:hydrolase/protein binding Chain: F: PDB Molecule:gtp cyclohydrolase i; PDBTitle: crystal structure of rat gtpchi/gfrp stimulatory complex 29 d1wpla_ not modelled 12.0 35 Fold:T-fold Superfamily:Tetrahydrobiopterin biosynthesis enzymes-like Family:GTP cyclohydrolase I 30 c3e8gB_ not modelled 11.6 3 PDB header:membrane protein Chain: B: PDB Molecule:potassium channel protein; PDBTitle: crystal structure of the the open nak channel-na+/ca2+ complex 31 d1wura1 not modelled 11.6 24 Fold:T-fold Superfamily:Tetrahydrobiopterin biosynthesis enzymes-like Family:GTP cyclohydrolase I 32 c1wm9D_ not modelled 11.6 24 PDB header:hydrolase Chain: D: PDB Molecule:gtp cyclohydrolase i; PDBTitle: structure of gtp cyclohydrolase i from thermus thermophilus hb8 33 d1cksa_ not modelled 11.1 33 Fold:Cell cycle regulatory proteins Superfamily:Cell cycle regulatory proteins Family:Cell cycle regulatory proteins 34 c2jwaA_ not modelled 11.0 25 PDB header:transferase Chain: A: PDB Molecule:receptor tyrosine-protein kinase erbb-2; PDBTitle: erbb2 transmembrane segment dimer spatial structure 35 d1qb3a_ not modelled 10.8 40 Fold:Cell cycle regulatory proteins Superfamily:Cell cycle regulatory proteins Family:Cell cycle regulatory proteins 36 c2vn2B_ not modelled 10.7 25 PDB header:replication Chain: B: PDB Molecule:chromosome replication initiation protein; PDBTitle: crystal structure of the n-terminal domain of dnad protein2 from geobacillus kaustophilus hta426 37 c2c1eB_ not modelled 9.6 35 PDB header:hydrolase/hydrolase inhibitor Chain: B: PDB Molecule:caspase-3 subunit p12; PDBTitle: crystal structures of caspase-3 in complex with aza-peptide michael2 acceptor inhibitors. 38 d2astc1 not modelled 9.1 27 Fold:Cell cycle regulatory proteins Superfamily:Cell cycle regulatory proteins Family:Cell cycle regulatory proteins 39 d2axtz1 not modelled 9.1 25 Fold:Transmembrane helix hairpin Superfamily:PsbZ-like Family:PsbZ-like 40 d1w96a2 not modelled 7.2 4 Fold:PreATP-grasp domain Superfamily:PreATP-grasp domain Family:BC N-terminal domain-like 41 d2j9ga2 not modelled 7.0 25 Fold:PreATP-grasp domain Superfamily:PreATP-grasp domain Family:BC N-terminal domain-like 42 d1ulza2 not modelled 6.9 29 Fold:PreATP-grasp domain Superfamily:PreATP-grasp domain Family:BC N-terminal domain-like 43 c2c2zB_ not modelled 6.8 31 PDB header:hydrolase/hydrolase inhibitor Chain: B: PDB Molecule:caspase-8 p10 subunit; PDBTitle: crystal structure of caspase-8 in complex with aza-peptide michael2 acceptor inhibitor 44 c2v79B_ not modelled 6.8 17 PDB header:dna-binding protein Chain: B: PDB Molecule:dna replication protein dnad; PDBTitle: crystal structure of the n-terminal domain of dnad from2 bacillus subtilis 45 d1jhfa1 not modelled 6.7 20 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:LexA repressor, N-terminal DNA-binding domain 46 d3c07a2 not modelled 6.6 20 Fold:Tetracyclin repressor-like, C-terminal domain Superfamily:Tetracyclin repressor-like, C-terminal domain Family:Tetracyclin repressor-like, C-terminal domain 47 c3iz5C_ not modelled 6.6 53 PDB header:ribosome Chain: C: PDB Molecule:60s ribosomal protein l3 (l3p); PDBTitle: localization of the large subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome 48 d1d1la_ not modelled 6.5 31 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:Phage repressors 49 c3sipB_ not modelled 6.4 43 PDB header:hydrolase/ligase/hydrolase Chain: B: PDB Molecule:caspase; PDBTitle: crystal structure of drice and diap1-bir1 complex 50 d1mzja2 not modelled 6.4 25 Fold:Thiolase-like Superfamily:Thiolase-like Family:Chalcone synthase-like 51 c2gutA_ not modelled 6.4 12 PDB header:transcription Chain: A: PDB Molecule:arc/mediator, positive cofactor 2 glutamine/q- PDBTitle: solution structure of the trans-activation domain of the2 human co-activator arc105 52 c2p22D_ not modelled 6.3 50 PDB header:transport protein Chain: D: PDB Molecule:hypothetical 12.0 kda protein in ade3-ser2 PDBTitle: structure of the yeast escrt-i heterotetramer core 53 d1zk8a2 not modelled 6.2 26 Fold:Tetracyclin repressor-like, C-terminal domain Superfamily:Tetracyclin repressor-like, C-terminal domain Family:Tetracyclin repressor-like, C-terminal domain 54 d1i3ja_ not modelled 6.2 19 Fold:DNA-binding domain of intron-encoded endonucleases Superfamily:DNA-binding domain of intron-encoded endonucleases Family:DNA-binding domain of intron-encoded endonucleases 55 d2cg4a1 not modelled 6.1 19 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Lrp/AsnC-like transcriptional regulator N-terminal domain 56 c3mkyP_ not modelled 6.1 7 PDB header:dna binding protein/dna Chain: P: PDB Molecule:protein sopb; PDBTitle: structure of sopb(155-323)-18mer dna complex, i23 form 57 d1i1ga1 not modelled 6.1 19 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Lrp/AsnC-like transcriptional regulator N-terminal domain 58 d4croa_ not modelled 6.1 31 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:Phage repressors 59 c2zihC_ not modelled 6.1 16 PDB header:protein transport Chain: C: PDB Molecule:vacuolar protein sorting-associated protein 74; PDBTitle: crystal structure of yeast vps74 60 c2qljB_ not modelled 6.1 35 PDB header:hydrolase/hydrolase inhibitor Chain: B: PDB Molecule:caspase-7; PDBTitle: crystal structure of caspase-7 with inhibitor ac-wehd-cho 61 c2ziiA_ not modelled 6.0 16 PDB header:protein transport Chain: A: PDB Molecule:vacuolar protein sorting-associated protein 74; PDBTitle: crystal structure of yeast vps74-n-term truncation variant 62 c2w7nA_ not modelled 5.9 33 PDB header:transcription/dna Chain: A: PDB Molecule:trfb transcriptional repressor protein; PDBTitle: crystal structure of kora bound to operator dna: insight2 into repressor cooperation in rp4 gene regulation 63 d2cyya1 not modelled 5.9 16 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Lrp/AsnC-like transcriptional regulator N-terminal domain 64 d2coba1 not modelled 5.9 26 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Psq domain 65 c3natB_ not modelled 5.8 20 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of conserved protein of unknown function ef_19772 from enterococcus faecalis 66 c3mkzU_ not modelled 5.7 9 PDB header:dna-binding protein/dna Chain: U: PDB Molecule:protein sopb; PDBTitle: structure of sopb(155-272)-18mer complex, p21 form 67 c1mhmB_ not modelled 5.7 18 PDB header:lyase Chain: B: PDB Molecule:s-adenosylmethionine decarboxylase; PDBTitle: crystal structure of s-adenosylmethionine decarboxylase2 from potato 68 c2ijlB_ not modelled 5.6 15 PDB header:transcription Chain: B: PDB Molecule:molybdenum-binding transcriptional repressor; PDBTitle: the structure of a putative mode from agrobacterium tumefaciens. 69 d2cfxa1 not modelled 5.6 22 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Lrp/AsnC-like transcriptional regulator N-terminal domain 70 d1bxya_ not modelled 5.4 35 Fold:Ribosomal protein L30p/L7e Superfamily:Ribosomal protein L30p/L7e Family:Ribosomal protein L30p/L7e 71 d2apob1 not modelled 5.4 15 Fold:Rubredoxin-like Superfamily:Nop10-like SnoRNP Family:Nucleolar RNA-binding protein Nop10-like 72 c2rbfB_ not modelled 5.3 27 PDB header:oxidoreductase/dna Chain: B: PDB Molecule:bifunctional protein puta; PDBTitle: structure of the ribbon-helix-helix domain of escherichia coli puta2 (puta52) complexed with operator dna (o2) 73 d1cy9a_ not modelled 5.2 29 Fold:Prokaryotic type I DNA topoisomerase Superfamily:Prokaryotic type I DNA topoisomerase Family:Prokaryotic type I DNA topoisomerase 74 d2ey4e1 not modelled 5.2 31 Fold:Rubredoxin-like Superfamily:Nop10-like SnoRNP Family:Nucleolar RNA-binding protein Nop10-like