Return to main results Retrieve Phyre Job Id

Job DescriptionP45767
Confidence18.46%DateThu Jan 5 12:03:42 GMT 2012
Rank20Aligned Residues20
% Identity20%Templated1igna2
SCOP infoDNA/RNA-binding 3-helical bundle Homeodomain-like DNA-binding domain of rap1
Resolution2.25

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.....
Predicted Secondary structure 














Query SS confidence 























Query Sequence  SHRRSTVKGSLSFANPTVRAWLFQ
Query Conservation                         
Alig confidence 







...



.







Template Conservation    
 

  ...



.





  
Template Sequence  EHAAHTEN. . . AWRD. RFRKFLLA
Template Known Secondary structure  TTTS
....T
Template Predicted Secondary structure 




....
Template SS confidence 























   532....... 540... ......550.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions