Return to main results Retrieve Phyre Job Id

Job DescriptionP0AC38
Confidence100.00%DateThu Jan 5 11:17:06 GMT 2012
Rank3Aligned Residues456
% Identity42%Templated1vdka_
SCOP infoL-aspartase-like L-aspartase-like L-aspartase/fumarase
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.........60.........70.........80.....
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Query Sequence  RIEEDLLGTREVPADAYYGVHTLRAIENFYISNNKISDIPEFVRGMVMVKKAAAMANKELQTIPKSVANAIIAACDEVLN
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Template Sequence  RIERDTMGEVRVPADKYWGAQTQRSLENFRIGTDRFRMPLEIIRAYGMLKKAAARANLELGELPEEIAKAIIQAAEEVV.
Template Known Secondary structure 
TT

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SSTTT
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   4.....10.........20.........30.........40.........50.........60.........70.........80..
 
   86...90.........100.........110.........120.........130.........140.........150.........160 ....
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Query Sequence  NGKCMDQFPVDVYQGGAGTSVNMNTNEVLANIGLELMGHQKGEYQYLNPNDHVNKCQSTNDAYPTGFRIAVYSSL. IKLV
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Template Conservation         
       
 

    
   

   
   

   
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Template Sequence  QGKWDDHFPLVVFQTGSGTQTNMNVNEVIANRASEILGKPLGSK. YAHPNDHVNRGQSSNDTFPTAMYVAVALALHQRLY
Template Known Secondary structure  TTTTGGG


BSSS
TT
TT

TTS
.SS





TTT

T
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   83......90.........100.........110.........120...... ...130.........140.........150.........160.
 
   165....170.........180.........190.........200.........210.........220.........230.........240....
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Query Sequence  DAINQLREGFERKAVEFQDILKMGRTQLQDAVPMTLGQEFRAFSILLKEEVKNIQRTAELLLEVNLGATAIGTGLNTPKE
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Template Sequence  PAVEGLIRTFTAKAQAFDQIVKVGRTHLMDAVPITLGQEIGSWAAQLKTTLAAVKEMEKGLYNLAIGGTAVGTGLNAHPR
Template Known Secondary structure  TTT
TTGGGG
TT
TTTSS
TTS
TT
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   162.......170.........180.........190.........200.........210.........220.........230.........240.
 
   245....250.........260.........270.........280.........290.........300.........310.........320....
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Query Sequence  YSPLAVKKLAEVTGFPCVPAEDLIEATSDCGAYVMVHGALKRLAVKMSKICNDLRLLSSGPRAGLNEINLPELQAGSSIM
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Template Sequence  FGELVAKYLAEETGLPFRVAENRFAALAAHDELVNVMGAIRTLAGALMKIGNDVRWLASGPYAGIGEITIPANEPGSSIM
Template Known Secondary structure  SS


S
TT

T

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   242.......250.........260.........270.........280.........290.........300.........310.........320.
 
   325....330.........340.........350.........360.........370.........380.........390.........400....
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Query Sequence  PAKVNPVVPEVVNQVCFKVIGNDTTVTMAAEAGQLQLNVMEPVIGQAMFESVHILTNACYNLLEKCINGITANKEVCEGY
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Template Sequence  PGKVNPTQVEALTMVVVRVYGNDHTVAFAGSQGNFQLNVYKPVMAYSTLESINLLADAVASFDAHLAQGIEPNLERIEEY
Template Known Secondary structure  TT



TT
BTTB
S
TGGG

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   322.......330.........340.........350.........360.........370.........380.........390.........400.
 
   405....410.........420.........430.........440.........450.........460.....
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Query Sequence  VYNSIGIVTYLNPFIGHHNGDIVGKICAETGKSVREVVLERGLLTEAELDDIFSVQNLMHP
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Template Sequence  LQKNPMLATALNKAIGYDKAAEIVKKALK. . KTLKQAALELGYLTEEEFDRIVVPMRLAKP
Template Known Secondary structure  TT
GGGG
STTTTTS

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   402.......410.........420.........430 .........440.........450.........460
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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