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Job DescriptionP0AC38
Confidence100.00%DateThu Jan 5 11:17:06 GMT 2012
Rank16Aligned Residues411
% Identity18%Templated1q5na_
SCOP infoL-aspartase-like L-aspartase-like L-aspartase/fumarase
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   22.......30.........40.........50.........60.........70.........80.........90.........100.
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Query Sequence  YYGVHTLRAIENFYISNNKISDIPEFVRGMVMVKKAAAMANKELQTIPKSVANAIIAACDEVLNNGKCMDQFPVDVYQGG
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Template Sequence  LFYQRDVTE. . . . . . . . . . IFSDRALVSYMVEAEVALAQAQAQVGVIPQSAATVIQRAAKTA. . . . . . IDKIDFDALATA
Template Known Secondary structure  S
..........TSTTSS
TT......

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   8.10...... ...20.........30.........40.........50......... 60.........70.
 
   102.......110.........120.........130.........140.........150.........160.........170.........180.
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Query Sequence  AGTSVNMNTNEVLANIGLELMGHQKGEYQYLNPNDHVNKCQSTNDAYPTGFRIAVYSSLIKLVDAINQLREGFERKAVEF
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Template Sequence  TGLAGNIAIPFVKQLTAIV. . . . . . . KDADEDAARYVHWGATSQDILDTACILQCRDALAIVQNQVQQCYETALSQAQTY
Template Known Secondary structure  SSS.......TT
TTGGGGTTTT

T
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   72.......80.........90 .........100.........110.........120.........130.........140....
 
   182.......190.........200.........210.........220.........230.........240.........250.........260.
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Query Sequence  QDILKMGRTQLQDAVPMTLGQEFRAFSILLKEEVKNIQRTAELLLEVNLGATAIGTGLNTPKEYSPLAVKKLAEVTGFPC
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Template Sequence  RHQVMMGRTWLQQALPITLGHKLARWASAFKRDLDRINAIKARVLVAQLGG. AVGSLASLQDQ. GSIVVEAYAKQLKLG.
Template Known Secondary structure  TT
TTSB




.TTSS
GGGTT
.T
B.
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   145....150.........160.........170.........180.........190..... ....200...... ...210.........220.
 
   262.......270.........280.........290.........300.........310.........320.........330.........340.
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Query Sequence  VPAEDLIEATSDCGAYVMVHGALKRLAVKMSKICNDLRLLSSGPRAGLNEINLPELQAGSSIMPAKVNPVVPEVVNQVCF
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Template Sequence  . . . QTACTWHGERDRIVEIASVLGIITGNVGKMARDWSLMMQTEI. . . . . . . . . . . . . . AEVFEPTRNPVAAASVLAAAN
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SS

SS

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   222.......230.........240.........250.........260... ......270.........280....
 
   342.......350.........360.........370.........380.........390.........400.........410.. ...
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Query Sequence  KVIGNDTTVTMAAEAGQLQLNVMEPVIGQAMFESVHILTNACYNLLEKCINGITANKEVCEGYVYNSIGIV. . . . . . TYL
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Template Sequence  RVPALMSSI. YQSMVQEHERSLGAWHAEWLSLPEIFQLTAGALERTLDVLKGMEVNAENMHQNIECTHGLIMAEAVMMAL
Template Known Secondary structure  .TT


TTS
SS

TTTTGGG
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   298.300...... ...310.........320.........330.........340.........350.........360.........370......
 
   416...420.........430 .........440..... ....450.........460.........470......
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Query Sequence  NPFIGHHNGDIVGKI. . . . CAETGKSVREVVLER. . . . GLLTEAELDDIFSVQNLMHPAYKAKRYTDES
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Template Sequence  APHMGRLNAHHVVEAACKTAVAEQKHLKDIISQVDEVKQYFNPSQLDEIFKPESYLGNIQDQIDAVLQE
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T

TT
TT

T
GGGG
TT
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   377..380.........390.........400.........410.........420.........430.........440.....
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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