Job Description P0AC38 Confidence 100.00% Date Thu Jan 5 11:17:06 GMT 2012 Rank 23 Aligned Residues 404 % Identity 18% Template c3c8tA_ PDB info PDB header:lyase Chain: A: PDB Molecule:fumarate lyase; PDBTitle: crystal structure of fumarate lyase from mesorhizobium sp. bnc1 Resolution 2.20 Å

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		18	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure						.
Query SS confidence						.
Query Sequence		P	A	D	A	.	Y	Y	G	V	H	T	L	R	A	I	E	N	F	Y	I	S	N	N	K	I	S	D	I	P	E	F	V	R	G	M	V	M	V	K	K	A	A	A	M	A	N	K	E	L	Q	T	I	P	K	S	V	A	N	A	I	I	A	A	C	D	E	V	L	N	N	G	K	C	M	D	Q	F	P	V	D
Query Conservation						.
Alig confidence						.										.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.
Template Sequence		P	L	Y	G	R	S	F	A	D	D	K	M	R	E	.	.	.	.	.	.	.	.	.	.	L	F	S	A	Q	S	F	I	S	R	C	V	E	T	E	V	A	L	A	R	A	Q	A	R	L	G	I	I	P	E	D	A	A	A	G	I	T	A	A	A	R	.	.	.	.	.	.	.	.	T	F	A	P	E	M	E
Template Known Secondary structure				S	S				S							.	.	.	.	.	.	.	.	.	.		T	S																						T	T	S	S														.	.	.	.	.	.	.	.
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.											.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.									.	.	.	.	.	.	80
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Y	Q	G	G	A	G	T	S	V	N	M	N	T	N	E	V	L	A	N	I	G	L	E	L	M	G	H	Q	K	G	E	Y	Q	Y	L	N	P	N	D	H	V	N	K	C	Q	S	T	N	D	A	Y	P	T	G	F	R	I	A	V	Y	S	S	L	I	K	L	V	D	A	I	N	Q	L	R	E	G	F	E	R
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.	.	.									.
Template Conservation																			.	.	.	.	.	.	.	.	.	.									.
Template Sequence		R	L	R	D	D	T	E	I	V	G	Y	P	I	L	P	L	V	.	.	.	.	.	.	.	.	.	.	E	Q	L	S	A	H	A	G	.	E	A	G	K	Y	L	H	W	G	A	T	T	Q	D	I	M	D	T	A	T	V	L	Q	I	R	D	G	L	A	L	I	S	R	R	I	E	S	V	R	K	A	L	A	A
Template Known Secondary structure											S	S	S						.	.	.	.	.	.	.	.	.	.								G	.	G	G	G	G	G	S	S	S	S
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.									.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.											.	.	100	.	.	.	.	.		.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	V	E	F	Q	D	I	L	K	M	G	R	T	Q	L	Q	D	A	V	P	M	T	L	G	Q	E	F	R	A	F	S	I	L	L	K	E	E	V	K	N	I	Q	R	T	A	E	L	L	L	E	V	N	L	G	A	T	A	I	G	T	G	L	N	T	P	K	E	Y	S	P	L	A	V	K	K	L	A	E	V
Query Conservation
Alig confidence																																																										.												.
Template Conservation																																																										.												.
Template Sequence		L	A	R	N	H	R	D	T	P	M	A	G	R	T	H	L	Q	H	A	L	P	V	T	F	G	Y	K	A	A	V	W	L	S	A	F	D	R	H	A	A	R	L	E	E	I	S	P	R	V	L	V	V	E	F	S	G	.	A	S	G	T	L	A	S	L	G	T	R	.	G	L	D	V	Q	R	E	L	A	R	E
Template Known Secondary structure						T	T	T								T	T																																			B						.	T	T	S	S		G	G	G	T	T		.
Template Predicted Secondary structure																																																										.												.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.		.	.	.	.	210	.	.	.	.	.	.		.	.	.	220	.	.	.	.	.	.	.
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	F	P	C	V	P	A	E	D	L	I	E	A	T	S	D	C	G	A	Y	V	M	V	H	G	A	L	K	R	L	A	V	K	M	S	K	I	C	N	D	L	R	L	L	S	S	G	P	R	A	G	L	N	E	I	N	L	P	E	L	Q	A	G	S	S	I	M	P	A	K	V	N	P	V	V	P	E	V	V
Query Conservation
Alig confidence						.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	N	L	G	.	.	.	.	V	P	S	I	T	W	H	S	A	R	D	A	V	A	E	T	V	Q	F	L	A	L	V	S	G	S	L	G	K	L	A	M	D	I	S	I	M	M	T	T	E	L	G	E	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	P	N	P	V	S	C	E	L	I
Template Known Secondary structure			T		B	.	.	.	.			S	S			S	S																														T	S	T	T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure						.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		228	.	230	.					.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.																	.	.	.	280	.	.	.	.	.	.	.
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.
Predicted Secondary structure																																																																													.	.	.	.	.
Query SS confidence																																																																													.	.	.	.	.
Query Sequence		N	Q	V	C	F	K	V	I	G	N	D	T	T	V	T	M	A	A	E	A	G	Q	L	Q	L	N	V	M	E	P	V	I	G	Q	A	M	F	E	S	V	H	I	L	T	N	A	C	Y	N	L	L	E	K	C	I	N	G	I	T	A	N	K	E	V	C	E	G	Y	V	Y	N	S	I	G	I	.	.	.	.	.
Query Conservation																																																																													.	.	.	.	.
Alig confidence																.																																																													.	.	.	.	.
Template Conservation																.
Template Sequence		L	A	G	A	R	I	V	R	N	H	A	T	S	M	.	L	D	A	M	I	H	D	F	E	R	A	T	G	P	W	H	L	E	W	S	A	V	P	E	G	F	A	V	A	S	G	I	L	Y	Q	A	E	F	M	L	G	G	L	Q	V	F	P	D	R	M	R	E	N	L	D	H	S	R	G	L	I	V	A	E	A
Template Known Secondary structure																.				T				T	T																																	S													T	T	T	T	T	G	G	G
Template Predicted Secondary structure																.
Template SS confidence
		303	.	.	.	.	.	.	310	.	.	.	.	.	.		.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
			412	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430					.	.	.	.	.	.	.	.	.	440	.	.	.	.					.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.
Predicted Secondary structure		.																				.	.	.	.															.	.	.	.
Query SS confidence		.																				.	.	.	.															.	.	.	.
Query Sequence		.	V	T	Y	L	N	P	F	I	G	H	H	N	G	D	I	V	G	K	I	.	.	.	.	C	A	E	T	G	K	S	V	R	E	V	V	L	E	.	.	.	.	R	G	L	L	T	E	A	E	L	D	D	I	F	S	V	Q	N	L	M	H	P	A	Y	K	A	K	R	Y	T
Query Conservation		.																				.	.	.	.															.	.	.	.
Alig confidence		.																				.	.	.	.															.	.	.	.
Template Conservation
Template Sequence		V	M	M	A	L	A	P	H	T	G	R	K	E	A	H	D	I	V	Y	L	G	C	R	R	A	V	E	D	K	T	G	L	F	E	V	L	R	T	M	P	E	V	A	K	P	L	G	E	E	A	L	R	D	L	T	D	P	R	N	Y	L	G	S	A	G	A	M	V	D	N	V
Template Known Secondary structure																													T	T	S							T	T																	T		G	G	G			T	T
Template Predicted Secondary structure
Template SS confidence
		382	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.