Job Description P0AC38 Confidence 100.00% Date Thu Jan 5 11:17:06 GMT 2012 Rank 27 Aligned Residues 428 % Identity 12% Template c3bhgA_ PDB info PDB header:lyase Chain: A: PDB Molecule:adenylosuccinate lyase; PDBTitle: crystal structure of adenylosuccinate lyase from legionella2 pneumophila Resolution 1.90 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.			.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.
Query SS confidence																			.	.
Query Sequence		D	L	L	G	T	R	E	V	P	A	D	A	Y	Y	G	V	H	.	.	T	L	R	A	I	E	N	F	Y	I	S	N	N	K	I	S	D	I	P	E	F	V	R	G	M	V	M	V	K	K	A	A	A	M	A	N	K	E	L	Q	T	I	P	K	S	V	A	N	A	I	I	A	A	C	D	E	V	L	N	N	G
Query Conservation																			.	.
Alig confidence						.	.	.	.										.	.					.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.																.	.	.	.	.	.	.	.	.	.
Template Sequence		N	A	I	S	.	.	.	.	P	I	D	G	R	Y	V	N	K	T	R	A	L	S	P	.	.	.	.	.	.	.	.	.	.	Y	F	S	E	F	A	L	T	Y	Y	R	L	X	V	E	I	K	W	F	E	S	L	A	A	N	D	T	I	P	E	V	P	A	L	D	N	K	A	R	K	F	L	S	D	L	I	S
Template Known Secondary structure		G		S	S	.	.	.	.	T	T	T	T	T	T					G	G	G	T	T	.	.	.	.	.	.	.	.	.	.	T	S	S																					T		T	T		T	T	S
Template Predicted Secondary structure						.	.	.	.																.	.	.	.	.	.	.	.	.	.
Template SS confidence
		7	.	.	10					.	.	.	.	.	.	.	.	.	20	.	.	.	.	.											.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.		.	.	.
Predicted Secondary structure																																														.																																.
Query SS confidence																																														.																																.
Query Sequence		K	C	M	D	Q	F	P	V	D	V	Y	Q	G	G	A	G	T	S	V	N	M	N	T	N	E	V	L	A	N	I	G	L	E	L	M	G	H	Q	K	G	E	Y	Q	Y	.	L	N	P	N	D	H	V	N	K	C	Q	S	T	N	D	A	Y	P	T	G	F	R	I	A	V	Y	S	S	L	I	K	.	L	V	D
Query Conservation																																														.																																.
Alig confidence																													.	.	.	.	.	.	.											.																																.
Template Conservation																													.	.	.	.	.	.	.
Template Sequence		N	F	N	E	S	E	A	E	K	I	K	E	F	E	K	Q	T	N	H	D	V	K	A	V	E	Y	Y	.	.	.	.	.	.	.	L	Q	D	K	F	Q	E	N	E	Q	L	K	S	C	V	A	F	I	H	F	A	C	T	S	E	D	I	N	N	L	A	Y	A	L	X	I	K	Q	A	I	A	Q	V	I	Q	P
Template Known Secondary structure		T													T	T	T		S	S									.	.	.	.	.	.	.						T	T	S	T	T	G	G	G	G	G	G	G	T	T	T	T																						T
Template Predicted Secondary structure																													.	.	.	.	.	.	.
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.								100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	N	Q	L	R	E	G	F	E	R	K	A	V	E	F	Q	D	I	L	K	M	G	R	T	Q	L	Q	D	A	V	P	M	T	L	G	Q	E	F	R	A	F	S	I	L	L	K	E	E	V	K	N	I	Q	R	T	A	E	L	L	L	E	V	N	L	G	A	T	A	I	G	T	G	L	N	T	P	K	E	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	I	A	E	I	X	G	S	I	T	L	L	G	K	Q	H	A	D	V	A	X	L	S	R	T	H	G	Q	P	A	T	P	T	T	X	G	K	E	L	V	N	F	V	A	R	L	K	R	P	Q	Q	Q	L	A	E	V	L	I	P	A	K	F	N	G	A	V	G	N	Y	N	A	H	V	A	A	Y	P	E	V	D
Template Known Secondary structure																	T	T	T								T	T																																						S	S	S	S									T	T	S
Template Predicted Secondary structure
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	P	L	A	V	K	K	L	A	E	V	T	G	F	P	C	V	P	A	E	D	L	I	E	A	T	S	D	C	G	A	Y	V	M	V	H	G	A	L	K	R	L	A	V	K	M	S	K	I	C	N	D	L	R	L	L	S	S	G	P	R	A	G	L	N	E	I	N	L	P	E	L	Q	A	G	S	S	I	M	P
Query Conservation
Alig confidence																									.	.	.																																						.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.																																						.	.	.	.	.	.	.	.	.
Template Sequence		W	R	K	H	C	A	N	F	V	T	S	L	G	L	S	F	N	A	Y	T	T	Q	I	.	.	.	E	P	H	D	G	I	A	E	V	S	Q	I	X	V	R	I	N	N	I	L	L	D	Y	T	Q	D	I	W	S	Y	I	S	L	G	Y	F	K	.	.	.	.	.	.	.	.	.	Q	K	T	S	S	T	X	P
Template Known Secondary structure													T	T					S	S		S	S	S	.	.	.																																	T	T	S			.	.	.	.	.	.	.	.	.						S	S
Template Predicted Secondary structure																									.	.	.																																						.	.	.	.	.	.	.	.	.
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.				.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.										.	.	.	.	290	.	.	.
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	V	N	P	V	V	P	E	V	V	N	Q	V	C	F	K	V	I	G	N	D	T	T	V	T	M	A	A	E	A	G	Q	L	Q	L	N	V	M	E	P	V	I	G	Q	A	M	F	E	S	V	H	I	L	T	N	A	C	Y	N	L	L	E	K	C	I	N	G	I	T	A	N	K	E	V	C	E	G	Y	V
Query Conservation
Alig confidence																																																																	.
Template Conservation																																																																	.
Template Sequence		H	K	V	N	P	I	D	F	E	N	A	E	G	N	L	G	L	S	N	A	L	F	I	H	F	A	N	K	L	T	Q	S	R	X	Q	R	D	L	S	D	S	T	V	L	R	N	L	G	V	A	F	S	Y	S	L	I	A	Y	H	S	V	A	K	.	G	N	D	K	L	Q	I	N	K	S	A	L	Q	K	D	L
Template Known Secondary structure						T																								T	T			S	T	T			T							T	T																		.			T	T
Template Predicted Secondary structure																																																																	.
Template SS confidence
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.		.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
		406	.	.	.	410	.	.	.	.	.	.	.	.	.									420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.			.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.																																						.	.
Query SS confidence																.	.	.	.	.	.	.	.																																						.	.
Query Sequence		Y	N	S	I	G	I	V	T	Y	L	N	P	F	I	.	.	.	.	.	.	.	.	G	H	H	N	G	D	I	V	G	K	I	C	A	E	T	G	K	S	V	R	E	V	V	L	E	R	G	L	L	T	E	A	E	L	D	D	I	.	.	F	S	V	Q	N	L	M	H	P	A	Y	K	A	K	R	Y
Query Conservation																.	.	.	.	.	.	.	.																																						.	.
Alig confidence																.	.	.	.	.	.	.	.																												.										.	.
Template Conservation																																																			.
Template Sequence		S	E	N	W	E	V	L	A	E	A	I	Q	T	V	X	R	R	Y	N	E	P	N	A	Y	E	Q	L	K	E	L	T	R	G	Q	X	I	D	A	E	N	L	K	K	F	I	K	T	L	S	.	I	P	E	E	A	K	A	E	L	X	K	L	T	P	E	T	Y	T	G	L	A	T	Q	L	V	K	A
Template Known Secondary structure			T		G	G	G	G											T	T		T	T										T	T	S													T	S		.	S													G	G	G			T	T
Template Predicted Secondary structure																																																			.
Template SS confidence
		379	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.		.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.