Job Description P0AC38 Confidence 100.00% Date Thu Jan 5 11:17:06 GMT 2012 Rank 28 Aligned Residues 436 % Identity 13% Template c2ptsA_ PDB info PDB header:lyase Chain: A: PDB Molecule:adenylosuccinate lyase; PDBTitle: crystal structure of wild type escherichia coli adenylosuccinate lyase Resolution 2.00 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70			.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																																																																		.	.
Query SS confidence																																																																		.	.
Query Sequence		I	E	E	D	L	L	G	T	R	E	V	P	A	D	A	Y	Y	G	V	H	T	L	R	A	I	E	N	F	Y	I	S	N	N	K	I	S	D	I	P	E	F	V	R	G	M	V	M	V	K	K	A	A	A	M	A	N	K	E	L	Q	T	I	P	K	.	.	S	V	A	N	A	I	I	A	A	C	D	E	V	L
Query Conservation																																																																		.	.
Alig confidence												.															.	.	.	.	.	.	.	.																																.	.
Template Conservation												.															.	.	.	.	.	.	.	.
Template Sequence		X	E	L	S	S	L	T	A	V	S	.	P	V	D	G	R	Y	G	D	K	V	S	A	L	R	.	.	.	.	.	.	.	.	G	I	F	S	E	Y	G	L	L	K	F	R	V	Q	V	E	V	R	W	L	Q	K	L	A	A	H	A	A	I	K	E	V	P	A	F	A	A	D	A	I	G	Y	L	D	A	I	V
Template Known Secondary structure						T	T	T		S	S	.	T	T	T	T	T	T	G	G	G	G					.	.	.	.	.	.	.	.	T	T	T	S																							T	T		T	T	S
Template Predicted Secondary structure												.															.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.									.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.		.
Predicted Secondary structure																																																																																.
Query SS confidence																																																																																.
Query Sequence		N	N	G	K	C	M	D	Q	F	P	V	D	V	Y	Q	G	G	A	G	T	S	V	N	M	N	T	N	E	V	L	A	N	I	G	L	E	L	M	G	H	Q	K	G	E	Y	Q	Y	L	N	P	N	D	H	V	N	K	C	Q	S	T	N	D	A	Y	P	T	G	F	R	I	A	V	Y	S	S	L	I	K	.	L
Query Conservation																																																																																.
Alig confidence					.	.																																					.	.	.	.	.	.																																.
Template Conservation					.	.																																					.	.	.	.	.	.
Template Sequence		A	S	F	.	.	S	E	E	D	A	A	R	I	K	T	I	E	R	T	T	N	H	D	V	K	A	V	E	Y	F	L	K	E	K	V	A	E	I	P	E	L	.	.	.	.	.	.	H	A	V	S	E	F	I	H	F	A	C	T	S	E	D	I	N	N	L	S	H	A	L	X	L	K	T	A	R	D	E	V	I
Template Known Secondary structure			T		.	.																S															T	T					.	.	.	.	.	.		T	T	G	G	G	T	T	T	T																						T
Template Predicted Secondary structure					.	.																																					.	.	.	.	.	.
Template SS confidence
		72	.	.			.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110							.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	A	I	N	Q	L	R	E	G	F	E	R	K	A	V	E	F	Q	D	I	L	K	M	G	R	T	Q	L	Q	D	A	V	P	M	T	L	G	Q	E	F	R	A	F	S	I	L	L	K	E	E	V	K	N	I	Q	R	T	A	E	L	L	L	E	V	N	L	G	A	T	A	I	G	T	G	L	N	T	P	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	P	Y	W	R	Q	L	I	D	G	L	K	D	L	A	V	Q	Y	R	D	I	P	L	L	S	R	T	H	G	Q	P	A	T	P	S	T	I	G	K	E	X	A	N	V	A	Y	R	X	E	R	Q	Y	R	Q	L	N	Q	V	E	I	L	G	K	I	N	G	A	V	G	N	Y	N	A	H	I	A	A	Y	P	E
Template Known Secondary structure																			T	T	T								T	T																																						T	T	S	S									T	T
Template Predicted Secondary structure
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Y	S	P	L	A	V	K	K	L	A	E	V	T	G	F	P	C	V	P	A	E	D	L	I	E	A	T	S	D	C	G	A	Y	V	M	V	H	G	A	L	K	R	L	A	V	K	M	S	K	I	C	N	D	L	R	L	L	S	S	G	P	R	A	G	L	N	E	I	N	L	P	E	L	Q	A	G	S	S	I
Query Conservation
Alig confidence																									.	.	.																																								.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.																																								.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	D	W	H	Q	F	S	E	E	F	V	T	S	L	G	I	Q	W	N	P	Y	T	T	.	.	.	Q	I	E	P	H	D	Y	I	A	E	L	F	D	C	V	A	R	F	N	T	I	L	I	D	F	D	R	D	V	W	G	Y	I	A	L	N	H	F	K	.	.	.	.	.	.	.	.	.	.	.	Q	K	T	I
Template Known Secondary structure		S													T	T								S	.	.	.	S	S																																	T	T				.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																									.	.	.																																								.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.				.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.												.	.	.	.
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	P	A	K	V	N	P	V	V	P	E	V	V	N	Q	V	C	F	K	V	I	G	N	D	T	T	V	T	M	A	A	E	A	G	Q	L	Q	L	N	V	M	E	P	V	I	G	Q	A	M	F	E	S	V	H	I	L	T	N	A	C	Y	N	L	L	E	K	C	I	N	G	I	T	A	N	K	E	V	C	E	G
Query Conservation
Alig confidence																																																																		.
Template Conservation																																																																		.
Template Sequence		X	P	H	K	V	N	P	I	D	F	E	N	S	E	G	N	L	G	L	S	N	A	V	L	Q	H	L	A	S	K	L	P	V	S	R	W	Q	R	D	L	T	D	S	T	V	L	R	N	L	G	V	G	I	G	Y	A	L	I	A	Y	Q	S	T	L	.	K	G	V	S	K	L	E	V	N	R	D	H	L	L	D
Template Known Secondary structure								T																								T	T			S	T	T			T						G	G	G																	.				T	T
Template Predicted Secondary structure																																																																		.
Template SS confidence
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.		.	.	.	.	.	.	.	.	370	.	.	.	.	.	.
		404	.	.	.	.	.	410	.	.	.					.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450			.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.
Predicted Secondary structure												.	.	.	.																																						.	.
Query SS confidence												.	.	.	.																																						.	.
Query Sequence		Y	V	Y	N	S	I	G	I	V	T	.	.	.	.	Y	L	N	P	F	I	G	H	H	N	G	D	I	V	G	K	I	C	A	E	T	G	K	S	V	R	E	V	V	L	E	R	G	L	L	T	E	.	.	A	E	L	D	D	I	F	S	V	Q	N	L	M	H	P	A	Y	K	A	K	R	Y	T	D
Query Conservation												.	.	.	.																																						.	.
Alig confidence												.	.	.	.																																						.	.
Template Conservation
Template Sequence		E	L	D	H	N	W	E	V	L	A	E	P	I	Q	T	V	X	R	R	Y	G	I	E	K	P	Y	E	K	L	K	E	L	T	R	V	D	A	E	G	X	K	Q	F	I	D	G	L	A	L	P	E	E	E	K	A	R	L	K	A	X	T	P	A	N	Y	I	G	R	A	I	T	X	V	D	E	L	K
Template Known Secondary structure				T	T		G	G	G	G											T	T		S	S																						T	S	S											T			T	T	T			T	T								G	G
Template Predicted Secondary structure
Template SS confidence
		377	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.