Job Description P0AC38 Confidence 100.00% Date Thu Jan 5 11:17:06 GMT 2012 Rank 13 Aligned Residues 411 % Identity 19% Template c2pfmA_ PDB info PDB header:lyase Chain: A: PDB Molecule:adenylosuccinate lyase; PDBTitle: crystal structure of adenylosuccinate lyase (purb) from bacillus2 anthracis Resolution 2.00 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	Y	G	V	H	T	L	R	A	I	E	N	F	Y	I	S	N	N	K	I	S	D	I	P	E	F	V	R	G	M	V	M	V	K	K	A	A	A	M	A	N	K	E	L	Q	T	I	P	K	S	V	A	N	A	I	I	A	A	C	D	E	V	L	N	N	G	K	C	M	D	Q	F	P	V	D	V	Y	Q	G	G
Query Conservation
Alig confidence											.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.
Template Sequence		R	Y	T	R	P	E	M	G	A	.	.	.	.	.	.	.	.	.	.	I	W	T	E	E	N	K	F	K	A	W	L	E	V	E	I	L	A	C	E	A	W	A	E	L	G	D	I	P	K	E	D	V	K	K	I	R	E	H	A	S	.	.	.	.	.	.	.	.	F	D	I	D	R	I	Y	E	I	E	K	E
Template Known Secondary structure		T	T								.	.	.	.	.	.	.	.	.	.		T	S																							T	S	S														.	.	.	.	.	.	.	.
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.											.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.									.	.	.	.	.	.	60	.	.	.	.	.
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure																																.
Query SS confidence																																.
Query Sequence		A	G	T	S	V	N	M	N	T	N	E	V	L	A	N	I	G	L	E	L	M	G	H	Q	K	G	E	Y	Q	Y	.	L	N	P	N	D	H	V	N	K	C	Q	S	T	N	D	A	Y	P	T	G	F	R	I	A	V	Y	S	S	L	I	K	L	V	D	A	I	N	Q	L	R	E	G	F	E	R	K	A	V	E
Query Conservation																																.
Alig confidence				.	.	.	.	.	.	.								.	.	.	.	.	.									.
Template Conservation				.	.	.	.	.	.	.								.	.	.	.	.	.
Template Sequence		T	R	.	.	.	.	.	.	.	H	D	V	V	A	F	T	.	.	.	.	.	.	R	A	V	S	E	T	P	A	L	G	E	E	R	K	W	V	H	Y	G	L	T	S	T	D	V	V	D	T	A	L	S	Y	I	L	K	Q	A	N	E	I	I	L	K	D	L	E	N	F	V	S	I	L	A	N	K	A	K	E
Template Known Secondary structure				.	.	.	.	.	.	.								.	.	.	.	.	.					T		T	T			G	G	G	G	G	T	T	T	T
Template Predicted Secondary structure				.	.	.	.	.	.	.								.	.	.	.	.	.
Template SS confidence
		66	.								.	.	70	.	.	.	.							.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure
Query SS confidence
Query Sequence		F	Q	D	I	L	K	M	G	R	T	Q	L	Q	D	A	V	P	M	T	L	G	Q	E	F	R	A	F	S	I	L	L	K	E	E	V	K	N	I	Q	R	T	A	E	L	L	L	E	V	N	L	G	A	T	A	I	G	T	G	L	N	T	P	K	E	Y	S	P	L	A	V	K	K	L	A	E	V	T	G	F	P
Query Conservation
Alig confidence																																																						.														.	.	.	.
Template Conservation																																																						.														.	.	.	.
Template Sequence		H	K	Y	T	I	M	M	G	R	T	H	G	V	H	A	E	P	T	T	F	G	L	K	L	G	L	W	Y	E	E	M	K	R	N	V	E	R	F	K	Q	A	A	N	T	V	R	V	G	K	L	S	G	.	A	V	G	T	Y	A	N	I	D	P	F	V	E	.	.	.	.	K	Y	V	C	E	N	L	G	L	E
Template Known Secondary structure		T	T	T								T	T																																	T								.	T	T	S	S		T	T	S						.	.	.	.							T	T
Template Predicted Secondary structure																																																						.														.	.	.	.
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.		.	.	.	.	.	190	.	.	.	.	.	.	.					.	.	200	.	.	.	.	.	.	.
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure
Query SS confidence
Query Sequence		C	V	P	A	E	D	L	I	E	A	T	S	D	C	G	A	Y	V	M	V	H	G	A	L	K	R	L	A	V	K	M	S	K	I	C	N	D	L	R	L	L	S	S	G	P	R	A	G	L	N	E	I	N	L	P	E	L	Q	A	G	S	S	I	M	P	A	K	V	N	P	V	V	P	E	V	V	N	Q	V	C
Query Conservation
Alig confidence								.	.	.																																											.
Template Conservation								.	.	.																																											.
Template Sequence		A	A	P	I	S	T	.	.	.	Q	T	L	Q	R	D	R	H	A	H	Y	M	S	T	L	A	L	I	A	T	S	I	E	K	M	A	V	E	I	R	G	L	Q	K	S	E	T	R	E	V	E	E	.	A	F	A	K	G	Q	K	G	S	S	A	M	P	H	K	R	N	P	I	G	S	E	N	M	T	G	L	A
Template Known Secondary structure				S	S		S	.	.	.	S	S			T																												T	S	T	T	T		S				.				T	T			S		S	S		T	T
Template Predicted Secondary structure								.	.	.																																											.
Template SS confidence
		208	.	210	.	.	.				.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.		.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.
Predicted Secondary structure																																																																												.	.	.	.	.	.
Query SS confidence																																																																												.	.	.	.	.	.
Query Sequence		F	K	V	I	G	N	D	T	T	V	T	M	A	A	E	A	G	Q	L	Q	L	N	V	M	E	P	V	I	G	Q	A	M	F	E	S	V	H	I	L	T	N	A	C	Y	N	L	L	E	K	C	I	N	G	I	T	A	N	K	E	V	C	E	G	Y	V	Y	N	S	I	G	I	V	T	Y	.	.	.	.	.	.
Query Conservation																																																																												.	.	.	.	.	.
Alig confidence												.																																																																.	.	.	.	.	.
Template Conservation												.
Template Sequence		R	V	I	R	G	Y	M	M	T	A	.	Y	E	N	V	P	L	W	H	E	R	D	I	S	H	S	S	A	E	R	V	I	L	P	D	A	T	I	A	L	N	Y	M	L	N	R	F	G	N	I	V	K	N	L	T	V	Y	P	E	N	M	K	R	N	M	T	R	T	Y	G	L	I	Y	S	Q	R	V	M	L	T
Template Known Secondary structure												.			T	S				T	T			S																														T													T	T	T	T	T	G	G	G
Template Predicted Secondary structure												.
Template SS confidence
		284	.	.	.	.	.	290	.	.	.		.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
							415	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.					.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.
Predicted Secondary structure		.	.	.	.	.																															.	.	.	.
Query SS confidence		.	.	.	.	.																															.	.	.	.
Query Sequence		.	.	.	.	.	L	N	P	F	I	G	H	H	N	G	D	I	V	G	K	I	C	A	E	T	G	K	S	V	R	E	V	V	L	E	.	.	.	.	R	G	L	L	T	E	A	E	L	D	D	I	F	S	V	Q	N	L	M	H	P	A	Y	K	A	K	R	Y	T
Query Conservation		.	.	.	.	.																															.	.	.	.
Alig confidence		.	.	.	.	.																															.	.	.	.
Template Conservation
Template Sequence		L	I	D	K	G	M	V	R	E	E	A	Y	D	I	V	Q	P	K	A	M	E	A	W	E	T	Q	V	Q	F	K	E	L	V	E	A	D	E	R	I	T	S	K	L	T	Q	E	E	I	N	E	C	F	N	Y	E	H	H	M	Q	H	V	D	T	I	F	E	R	L
Template Known Secondary structure					T	T																					T									T						T	T	S									T		G	G	G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430