Return to main results Retrieve Phyre Job Id

Job DescriptionP0AC38
Confidence100.00%DateThu Jan 5 11:17:06 GMT 2012
Rank30Aligned Residues333
% Identity15%Templatec2fenA_
PDB info PDB header:isomeraseChain: A: PDB Molecule:3-carboxy-cis,cis-muconate lactonizing enzyme; PDBTitle: 3-carboxy-cis,cis-muconate lactonizing enzyme from agrobacterium2 radiobacter s2
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20. ........30.........40.........50.........60.........70.........80.....
Predicted Secondary structure 










.....

















Query SS confidence 










. . . . .































































Query Sequence  LLGTREVPADA. . . . . YYGVHTLRAIENFYISNNKISDIPEFVRGMVMVKKAAAMANKELQTIPKSVANAIIAACDEVLN
Query Conservation   

    
 
 ..... 

  
 

   
             
 
   

 
 
 
    
 

   
  
  
  

  
Alig confidence 


....



.....








..........








































....
Template Conservation    
....
 

              .......... 

    
 
 
 

 
 
 
  
 



   
  
     ....
Template Sequence  SLS. . . . PFEHPFLSGLFGDSEIIE. . . . . . . . . . LFSAKADIDAMIRFETALAQAEAEASIFADDEAEAIVSGLS. . . .
Template Known Secondary structure 

S....TTS
TTT

G..........GGSTTSS
....
Template Predicted Secondary structure 


....









..........






....
Template SS confidence 















































































   2.. .....10.........20.. .......30.........40.........50.........60...
 
   86...90.........100.........110.........120.........130.........140.........150.........160.....
Predicted Secondary structure 























Query SS confidence 















































































Query Sequence  NGKCMDQFPVDVYQGGAGTSVNMNTNEVLANIGLELMGHQKGEYQYLNPNDHVNKCQSTNDAYPTGFRIAVYSSLIKLVD
Query Conservation         
       
 

   







  
   
    
          

 
 




  

  
  
  
  
  
Alig confidence  ....























..........









































Template Conservation  ....    
              
   
..........  
           

 
 

 

 


  
 

  
  
  
Template Sequence  . . . . EFAADMSALRHGVAKDGVVVPELI. . . . . . . . . . RQMRAAVAGQAADKVHFGATSQDVIDTSLMLRLKMAAEIIAT
Template Known Secondary structure  ....T



SSS..........TS
SGGGGSTTTT

Template Predicted Secondary structure  ....






..........











Template SS confidence 















































































   64.....70.........80....... ..90.........100.........110.........120.........
 
   166...170.........180.........190.........200.........210.........220.........230.........240.....
Predicted Secondary structure 




























Query SS confidence 















































































Query Sequence  AINQLREGFERKAVEFQDILKMGRTQLQDAVPMTLGQEFRAFSILLKEEVKNIQRTAELLLEVNLGATAIGTGLNTPKEY
Query Conservation   
  
   
   
    

 
 



 
 
 
 


         
 
   

      
    







        
Alig confidence 


































































.



.






Template Conservation   
  
   
   
       
 



 
 
 
 
 
         
 
   

           


.
 

. 
     
Template Sequence  RLGHLIDTLGDLASRDGHKPLTGYTRMQAAIGITVADRAAGWIAPLERHLLRLETFAQNGFALQFGG. AAGT. LEKLGDN
Template Known Secondary structure  STTSTTSSB




.TTSS.
TTTGGG
Template Predicted Secondary structure 



















.

.






Template SS confidence 















































































   130.........140.........150.........160.........170.........180.........190...... ...200 .......
 
   246...250.........260.........270.........280.........290.........300.........310.........320.....
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  SPLAVKKLAEVTGFPCVPAEDLIEATSDCGAYVMVHGALKRLAVKMSKICNDLRLLSSGPRAGLNEINLPELQAGSSIMP
Query Conservation         

  


              

   
    
  

  
 


 

 



 
  
  

  
    





Alig confidence 













.....





































............










Template Conservation         

  


.....         

   
    
      
 


 

  

............
 
  


 

Template Sequence  AGAVRADLAKRLGL. . . . . ADRPQWHNQRDGIAEFANLLSLVTGTLGKFGQDIALMA. . . . . . . . . . . . EIGSEIRLSGG
Template Known Secondary structure  TT
.....B




TT

............
SS
S
Template Predicted Secondary structure 


.....





............










Template SS confidence 















































































   208.210.........220. ........230.........240.........250......... 260.........270
 
   326...330.........340.........350.........360.........370.........380.........390.....
Predicted Secondary structure 
















Query SS confidence 





































































Query Sequence  AKVNPVVPEVVNQVCFKVIGNDTTVTMAAEAGQLQLNVMEPVIGQAMFESVHILTNACYNLLEKCINGIT
Query Conservation   




  
 
   
  
 
              
 
          
     
           
 

 
Alig confidence 



















.
















































Template Conservation   
 

   
 
   
     .             


      
   
          
     
   

Template Sequence  GKQNPVNAETLVTLARFNAV. QISALHQSLVQEQERSGAGWMLEWLTLPQMVTATGTSLLVAERLAAQID
Template Known Secondary structure 




.TT


TT

T
Template Predicted Secondary structure 



.







Template SS confidence 





































































   271........280.........290 .........300.........310.........320.........330.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions