Job Description P0AC38 Confidence 100.00% Date Thu Jan 5 11:17:06 GMT 2012 Rank 18 Aligned Residues 416 % Identity 21% Template c2e9fC_ PDB info PDB header:lyase Chain: C: PDB Molecule:argininosuccinate lyase; PDBTitle: crystal structure of t.th.hb8 argininosuccinate lyase complexed with2 l-arginine Resolution 2.80 Å

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	N	F	Y	I	S	N	N	K	I	S	D	I	P	E	F	V	R	G	M	V	M	V	K	K	A	A	A	M	A	N	K	E	L	Q	T	I	P	K	S	V	A	N	A	I	I	A	A	C	D	E	V	L	N	N	G	K	C	M	D	Q	F	P	V	D	V	Y	Q	G	G	A	G	T	S	V	N	M	N	T
Query Conservation
Alig confidence									.	.	.																																																	.									.	.	.	.	.	.	.	.
Template Conservation									.	.	.																																																	.									.	.	.	.	.	.	.	.
Template Sequence		A	A	R	F	N	A	S	.	.	.	L	A	F	D	R	A	L	W	R	E	D	L	W	Q	N	R	V	H	A	R	M	L	H	A	V	G	L	L	S	A	E	E	L	E	A	I	L	K	G	L	D	R	I	E	E	E	I	E	.	A	G	T	F	P	W	R	E	.	.	.	.	.	.	.	.	E	L	E	D	V
Template Known Secondary structure									.	.	.					G	G	G																			T	S	S																					.		T		S				G	.	.	.	.	.	.	.	.	G	G		S
Template Predicted Secondary structure									.	.	.																																																	.									.	.	.	.	.	.	.	.
Template SS confidence
		18	.	20	.	.	.	.				.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.		.	.	.	.	.	.	.	80									.	.	.	.	.
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.			.	.	.	.
Predicted Secondary structure																																																																												.	.
Query SS confidence																																																																												.	.
Query Sequence		N	E	V	L	A	N	I	G	L	E	L	M	G	H	Q	K	G	E	Y	Q	Y	L	N	P	N	D	H	V	N	K	C	Q	S	T	N	D	A	Y	P	T	G	F	R	I	A	V	Y	S	S	L	I	K	L	V	D	A	I	N	Q	L	R	E	G	F	E	R	K	A	V	E	F	Q	D	I	.	.	L	K	M	G
Query Conservation																																																																												.	.
Alig confidence															.	.	.	.	.	.	.	.	.																																																					.	.
Template Conservation															.	.	.	.	.	.	.	.	.
Template Sequence		H	M	N	L	E	A	R	L	T	E	L	V	G	.	.	.	.	.	.	.	.	.	P	P	G	G	K	L	H	T	A	R	S	R	N	D	Q	V	A	T	D	L	R	L	Y	L	R	G	A	I	D	E	L	L	A	L	L	L	A	L	R	R	V	L	V	R	E	A	E	K	H	L	D	P	L	Y	V	L	P	G
Template Known Secondary structure															.	.	.	.	.	.	.	.	.	G	G	G	G	G	T	T	T	T																																								T	T	T	T	T
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.										.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.		.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.
Query SS confidence																																																	.
Query Sequence		R	T	Q	L	Q	D	A	V	P	M	T	L	G	Q	E	F	R	A	F	S	I	L	L	K	E	E	V	K	N	I	Q	R	T	A	E	L	L	L	E	V	N	L	G	A	T	A	I	.	G	T	G	L	N	T	P	K	E	Y	S	P	L	A	V	K	K	L	A	E	V	T	G	F	P	C	V	P	A	E	D	L
Query Conservation																																																	.
Alig confidence																																																	.										.	.	.	.	.	.	.										.
Template Conservation																																																											.	.	.	.	.	.	.										.
Template Sequence		Y	T	H	L	Q	R	A	Q	P	V	L	L	A	H	W	F	L	A	Y	Y	E	M	L	K	R	D	A	G	R	L	E	D	A	K	E	R	L	N	E	S	P	L	G	A	A	A	L	A	G	T	G	F	P	I	D	R	H	.	.	.	.	.	.	.	F	T	A	R	E	L	G	F	K	.	A	P	M	R	N	S
Template Known Secondary structure				T	T																																	T		S	B		T	T		T	T	S	S			S	S						.	.	.	.	.	.	.						T	T		S	.	S	B		S
Template Predicted Secondary structure																																																											.	.	.	.	.	.	.										.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.								.	.	.	.	.	.	220	.	.		.	.	.	.	.	.
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	A	T	S	D	C	G	A	Y	V	M	V	H	G	A	L	K	R	L	A	V	K	M	S	K	I	C	N	D	L	R	L	L	S	S	G	P	R	A	G	L	N	E	I	N	L	P	E	L	Q	A	G	S	S	I	M	P	A	K	V	N	P	V	V	P	E	V	V	N	Q	V	C	F	K	V	I	G	N	D
Query Conservation
Alig confidence																																															.	.
Template Conservation																																															.	.
Template Sequence		L	D	A	V	A	S	R	D	F	A	L	E	V	L	S	A	L	N	I	G	M	L	H	L	S	R	M	A	E	E	L	I	L	Y	S	T	E	E	F	G	F	V	E	V	P	.	.	D	A	F	A	T	G	S	S	I	M	P	Q	K	K	N	P	D	I	L	E	L	I	R	A	K	A	G	R	V	L	G	A	F
Template Known Secondary structure																																				T	S	T	T	T							.	.	G	G	G					S	S	S	T	T													T
Template Predicted Secondary structure																																															.	.
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.			.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
		348	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Query SS confidence																																																																										.	.	.	.	.	.	.	.
Query Sequence		T	T	V	T	M	A	A	E	A	G	Q	L	Q	L	N	V	M	E	P	V	I	G	Q	A	M	F	E	S	V	H	I	L	T	N	A	C	Y	N	L	L	E	K	C	I	N	G	I	T	A	N	K	E	V	C	E	G	Y	V	Y	N	S	I	G	I	V	T	Y	L	N	P	F	I	.	.	.	.	.	.	.	.
Query Conservation																																																																										.	.	.	.	.	.	.	.
Alig confidence																																				.																																						.	.	.	.	.	.	.	.
Template Conservation																																				.
Template Sequence		V	G	L	S	A	V	V	K	G	L	P	L	A	Y	N	K	D	L	Q	E	D	K	E	P	L	L	D	A	L	A	T	Y	R	D	.	S	L	R	L	L	A	A	L	L	P	G	L	K	W	R	R	E	R	M	W	R	A	A	E	G	G	Y	T	L	A	T	E	L	A	D	Y	L	A	E	K	G	L	P	F	R
Template Known Secondary structure									T	T			S	S			G	G	G	G	G	G														.									G	G	G													S		S	S	T	T											T	T
Template Predicted Secondary structure																																				.
Template SS confidence
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340		.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
			420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.					.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.								.	.	.	.	.		.	470	.	.	.	.	.	.	.	.
Predicted Secondary structure		.																											.	.	.	.																			.	.	.	.	.	.	.						.
Query SS confidence		.																											.	.	.	.																			.	.	.	.	.	.	.						.
Query Sequence		.	G	H	H	N	G	D	I	V	G	K	I	C	A	E	T	G	K	S	V	R	E	V	V	L	E	R	.	.	.	.	G	L	L	T	E	A	E	L	D	D	I	F	S	V	Q	N	L	M	.	.	.	.	.	.	.	H	P	A	Y	K	.	A	K	R	Y	T	D	E	S	E	Q
Query Conservation		.																											.	.	.	.																			.	.	.	.	.	.	.						.
Alig confidence		.																											.	.	.	.																			.	.	.	.	.	.	.						.
Template Conservation
Template Sequence		E	A	H	H	V	V	G	R	L	V	R	R	L	V	E	E	G	R	A	L	K	D	L	T	L	E	E	L	Q	A	H	H	P	L	F	A	E	D	A	L	P	L	L	R	L	E	T	A	I	H	R	R	R	S	Y	G	G	T	A	P	E	A	V	R	E	R	L	E	E	A	K	K
Template Known Secondary structure																		T			S	S	S											T	T			G	G	G	G	G	G	S	S					T	T	S			S	T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		386	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.