Job Description P0AC38 Confidence 100.00% Date Thu Jan 5 11:17:06 GMT 2012 Rank 26 Aligned Residues 394 % Identity 15% Template c1yisA_ PDB info PDB header:lyase Chain: A: PDB Molecule:adenylosuccinate lyase; PDBTitle: structural genomics of caenorhabditis elegans: adenylosuccinate lyase Resolution 2.40 Å

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		18	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		P	A	D	A	Y	Y	.	G	V	H	T	L	R	A	I	E	N	F	Y	I	S	N	N	K	I	S	D	I	P	E	F	V	R	G	M	V	M	V	K	K	A	A	A	M	A	N	K	E	L	Q	T	I	P	K	S	V	A	N	A	I	I	A	A	C	D	E	V	L	N	N	G	K	C	M	D	Q	F	P	V	D
Query Conservation								.
Alig confidence								.								.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.
Template Sequence		V	L	S	T	R	Y	C	K	N	S	P	L	V	S	.	.	.	.	.	.	.	.	.	.	I	L	S	E	T	N	K	A	T	L	W	R	Q	L	W	I	W	L	A	E	A	E	K	E	L	G	L	K	Q	V	T	Q	D	A	I	D	E	X	K	S	N	.	.	.	.	.	.	.	.	R	D	V	F	D	W	P
Template Known Secondary structure						T	T	T	T	T		T				.	.	.	.	.	.	.	.	.	.		T	S																						T	T		T	T	S											T	.	.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.											.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.									.	.	.	.	.	70	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Y	Q	G	G	A	G	T	S	V	N	M	N	T	N	E	V	L	A	N	I	G	L	E	L	M	G	H	Q	K	G	E	Y	Q	Y	L	N	P	N	D	H	V	N	K	C	Q	S	T	N	D	A	Y	P	T	G	F	R	I	A	V	Y	S	S	L	I	K	L	V	D	A	I	N	Q	L	R	E	G	F	E	R
Query Conservation
Alig confidence													.	.	.	.							.	.	.	.	.	.										.
Template Conservation													.	.	.	.							.	.	.	.	.	.										.
Template Sequence		F	I	R	S	E	E	R	K	L	K	H	.	.	.	.	D	V	X	A	H	N	.	.	.	.	.	.	H	A	F	G	K	L	C	P	T	.	A	A	G	I	I	H	L	G	A	T	S	C	F	V	Q	D	N	A	D	L	I	A	Y	R	D	S	I	D	H	I	L	K	R	F	A	T	V	I	D	R	L	A	A
Template Known Secondary structure										S	S		.	.	.	.							.	.	.	.	.	.								T	T	.	T	G	G	G	T	T	T	T
Template Predicted Secondary structure													.	.	.	.							.	.	.	.	.	.										.
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.					.	.	.	.	.	.							.	90	.	.	.	.	.	.	.		.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.							.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure																																																																.	.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.	.
Query Sequence		K	A	V	E	F	Q	D	I	L	K	M	G	R	T	Q	L	Q	D	A	V	P	M	T	L	G	Q	E	F	R	A	F	S	I	L	L	K	E	E	V	K	N	I	Q	R	T	A	E	L	L	L	E	V	N	L	G	A	T	A	I	G	T	G	.	.	.	.	.	.	L	N	T	P	K	E	Y	S	P	L	A	V
Query Conservation																																																																.	.	.	.	.	.
Alig confidence																																																										.						.	.	.	.	.	.
Template Conservation																																																										.
Template Sequence		F	S	L	K	N	K	E	V	V	T	V	G	R	T	H	Y	Q	T	A	S	L	V	T	V	G	K	R	G	V	L	W	A	Q	E	L	L	X	A	F	Q	S	L	S	E	F	R	D	K	X	R	F	R	G	I	K	G	.	A	T	G	T	Q	D	S	F	L	T	L	F	A	G	D	E	S	K	V	E	A	L	D
Template Known Secondary structure						T	T	T								T	T																																			B			S		T	.	T	T	S	S								T	T	T
Template Predicted Secondary structure																																																										.
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure
Query SS confidence
Query Sequence		K	K	L	A	E	V	T	G	F	P	C	V	P	A	E	D	L	I	E	A	T	S	D	C	G	A	Y	V	M	V	H	G	A	L	K	R	L	A	V	K	M	S	K	I	C	N	D	L	R	L	L	S	S	G	P	R	A	G	L	N	E	I	N	L	P	E	L	Q	A	G	S	S	I	M	P	A	K	V	N	P
Query Conservation
Alig confidence												.							.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.							.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	L	V	T	K	K	A	N	F	S	.	N	R	F	L	I	T	.	G	Q	T	Y	S	R	Q	Q	D	S	Q	L	V	F	S	L	S	L	L	G	A	A	A	K	K	V	C	T	D	I	R	V	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	A	F	G	E	L	L	E	P	K	K	N	P
Template Known Secondary structure								T	T		S	.		B		S	S		.	S	S	S			T																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T	S
Template Predicted Secondary structure												.							.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		220	.	.	.	.	.	.	.	.	.		230	.	.	.	.	.		.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.																	.	270	.	.	.	.	.	.	.	.	.	280	.
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	P	E	V	V	N	Q	V	C	F	K	V	I	G	N	D	T	T	V	T	M	A	A	E	A	G	Q	L	Q	L	N	V	M	E	P	V	I	G	Q	A	M	F	E	S	V	H	I	L	T	N	A	C	Y	N	L	L	E	K	C	I	N	G	I	T	A	N	K	E	V	C	E	G	Y	V	Y	N	S	I	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		X	K	S	E	R	C	C	A	L	S	R	K	L	I	N	A	P	Q	E	A	L	T	I	L	A	D	Q	G	L	E	R	T	L	D	D	S	A	G	R	R	X	L	I	P	D	V	L	L	T	A	E	A	L	L	T	T	L	Q	N	I	F	E	G	L	S	V	Q	T	D	N	V	K	K	I	V	E	D	E	I	A
Template Known Secondary structure																T	S										T			T	T			G	G	G
Template Predicted Secondary structure
Template SS confidence
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
		411	.	.	.									.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.		.	.	.	.	450	.	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.																																.
Query SS confidence						.	.	.	.	.	.	.	.																																.
Query Sequence		I	V	T	Y	.	.	.	.	.	.	.	.	L	N	P	F	I	G	H	H	N	G	D	I	V	G	K	I	C	A	E	T	G	K	S	V	R	E	V	V	L	E	R	.	G	L	L	T	E	A	E	L	D	D	I	F	S	V
Query Conservation						.	.	.	.	.	.	.	.																																.
Alig confidence						.	.	.	.	.	.	.	.																																.
Template Conservation
Template Sequence		F	L	G	L	E	K	A	X	X	X	L	Q	T	X	A	D	P	F	F	D	S	V	R	D	R	V	V	G	L	V	N	N	P	I	N	F	T	G	R	C	V	S	Q	T	E	S	F	I	A	K	E	L	K	P	T	I	D	K
Template Known Secondary structure																T	T	T	T	S	T	T	T											G	G	G	G	S	T	T												T						G	G
Template Predicted Secondary structure
Template SS confidence
		375	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.