Job Description P0AC38 Confidence 100.00% Date Thu Jan 5 11:17:06 GMT 2012 Rank 4 Aligned Residues 448 % Identity 38% Template c1yfmA_ PDB info PDB header:lyase Chain: A: PDB Molecule:fumarase; PDBTitle: recombinant yeast fumarase Resolution 2.60 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	R	I	E	E	D	L	L	G	T	R	E	V	P	A	D	A	Y	Y	G	V	H	T	L	R	A	I	E	N	F	Y	I	S	N	N	K	I	S	D	I	P	E	F	V	R	G	M	V	M	V	K	K	A	A	A	M	A	N	K	E	L	Q	T	I	P	K	S	V	A	N	A	I	I	A	A	C	D	E	V	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	R	T	E	T	D	A	F	G	E	I	H	V	P	A	D	K	Y	W	G	A	Q	T	Q	R	S	F	Q	N	F	K	I	G	G	A	R	E	R	M	P	L	P	L	V	H	A	F	G	V	L	K	K	S	A	A	I	V	N	E	S	L	G	G	L	D	P	K	I	S	K	A	I	Q	Q	A	A	D	E	V	A
Template Known Secondary structure							S	S	S							S	S												T	T			T	T	G	G	G	G	B																							T	T		S
Template Predicted Secondary structure
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.		.	.	.	160	.	.	.
Predicted Secondary structure																																																																										.
Query SS confidence																																																																										.
Query Sequence		N	N	G	K	C	M	D	Q	F	P	V	D	V	Y	Q	G	G	A	G	T	S	V	N	M	N	T	N	E	V	L	A	N	I	G	L	E	L	M	G	H	Q	K	G	E	Y	Q	Y	L	N	P	N	D	H	V	N	K	C	Q	S	T	N	D	A	Y	P	T	G	F	R	I	A	V	.	Y	S	S	L	I	K	L
Query Conservation																																																																										.
Alig confidence		.																																				.	.	.	.	.	.	.	.	.	.																											.
Template Conservation		.																																				.	.	.	.	.	.	.	.	.	.
Template Sequence		.	S	G	K	L	D	D	H	F	P	L	V	V	F	Q	T	G	S	G	T	Q	S	N	M	N	A	N	E	V	I	S	N	R	A	I	E	.	.	.	.	.	.	.	.	.	.	I	V	H	P	N	N	H	C	N	Q	S	Q	S	S	N	D	T	F	P	T	V	M	H	I	A	A	S	L	Q	I	Q	N	E	L
Template Known Secondary structure		.		T	S	S	G	G	G				B	S	S	S		T	T																			.	.	.	.	.	.	.	.	.	.									T	T	T																					T	T
Template Predicted Secondary structure		.																																				.	.	.	.	.	.	.	.	.	.
Template SS confidence
			108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.											.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	A	I	N	Q	L	R	E	G	F	E	R	K	A	V	E	F	Q	D	I	L	K	M	G	R	T	Q	L	Q	D	A	V	P	M	T	L	G	Q	E	F	R	A	F	S	I	L	L	K	E	E	V	K	N	I	Q	R	T	A	E	L	L	L	E	V	N	L	G	A	T	A	I	G	T	G	L	N	T	P	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	P	E	L	T	N	L	K	N	A	L	E	A	K	S	K	E	F	D	H	I	V	K	I	G	R	T	H	L	Q	D	A	T	P	L	T	L	G	Q	E	F	S	G	Y	V	Q	Q	V	E	N	G	I	Q	R	V	A	H	S	L	K	T	L	S	F	L	A	Q	G	G	T	A	V	G	T	G	L	N	T	K	P
Template Known Secondary structure																			T	T	T								T	T																																		T				T	T		T	T	T	S	S		T	T	S		T
Template Predicted Secondary structure
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Y	S	P	L	A	V	K	K	L	A	E	V	T	G	F	P	C	V	P	A	E	D	L	I	E	A	T	S	D	C	G	A	Y	V	M	V	H	G	A	L	K	R	L	A	V	K	M	S	K	I	C	N	D	L	R	L	L	S	S	G	P	R	A	G	L	N	E	I	N	L	P	E	L	Q	A	G	S	S	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	F	D	V	K	I	A	E	Q	I	S	K	E	T	G	L	K	F	Q	T	A	P	N	R	F	E	A	L	A	A	H	D	A	I	V	E	C	S	G	A	L	N	T	L	A	C	S	L	F	K	I	A	Q	D	I	R	Y	L	G	S	G	P	R	C	G	Y	H	E	L	M	L	P	E	N	E	P	G	S	S	I
Template Known Secondary structure		T														S	S						S																																					T			S	S	S	S										S				T	T
Template Predicted Secondary structure
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	P	A	K	V	N	P	V	V	P	E	V	V	N	Q	V	C	F	K	V	I	G	N	D	T	T	V	T	M	A	A	E	A	G	Q	L	Q	L	N	V	M	E	P	V	I	G	Q	A	M	F	E	S	V	H	I	L	T	N	A	C	Y	N	L	L	E	K	C	I	N	G	I	T	A	N	K	E	V	C	E	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	P	G	K	V	N	P	T	Q	N	E	A	L	T	Q	V	C	V	Q	V	M	G	N	N	A	A	I	T	F	A	G	S	Q	G	Q	F	E	L	N	V	F	K	P	V	M	I	A	N	L	L	N	S	I	R	L	I	T	D	A	A	Y	S	F	R	V	H	C	V	E	G	I	K	A	N	E	P	R	I	H	E
Template Known Secondary structure		S	T	T																																B	T	T	B		S																											T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.
		404	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	V	Y	N	S	I	G	I	V	T	Y	L	N	P	F	I	G	H	H	N	G	D	I	V	G	K	I	C	A	E	T	G	K	S	V	R	E	V	V	L	E	R	G	L	L	T	E	A	E	L	D	D	I	F	S	V	Q	N	L	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	T	K	S	L	M	L	V	T	A	L	N	P	K	I	G	Y	D	A	A	S	K	V	A	K	N	A	H	K	K	G	I	T	L	K	E	S	A	L	E	L	G	V	L	T	E	K	E	F	D	E	W	V	V	P	E	H	M	L
Template Known Secondary structure							S	G	G	G	T	T	T	G	G	G	T																T										T	T	S												G	G	G
Template Predicted Secondary structure
Template SS confidence
		426	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.