Return to main results Retrieve Phyre Job Id

Job DescriptionP76556
Confidence99.80%DateThu Jan 5 12:24:35 GMT 2012
Rank53Aligned Residues149
% Identity17%Templated1x1ra1
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases G proteins
Resolution1.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1. .......10.........20...... ...30.........40.........50.........60.........70
Predicted Secondary structure 
..









........














Query SS confidence 

. .























. . . . . . . .











































Query Sequence  MK. . RIAFVGSVGAGKTTLFNALQGNYT. . . . . . . . LARKTQAVEFNDKGDIDTPGEYFNHPRWYHALITTLQDVDMLIY
Query Conservation 
 ..

 


    






 
     ........                                       
 

 
Alig confidence 

..























........











































Template Conservation   
  





   






 
     
                                                    
Template Sequence  LPTYKLVVVGDGGVGKSALTIQFFQKIFVPDYDPTIEDSYLKHTEIDNQWAILDVLDTAGQEEFSAMREQYMRTGDGFLI
Template Known Secondary structure 



TTSSSS

TT

TT

TT

S
GGG
SS
S
Template Predicted Secondary structure 











































Template SS confidence 















































































   11........20.........30.........40.........50.........60.........70.........80.........90
 
   71........80......... 90.........100.........110.. .......120.........130... ......140.
Predicted Secondary structure 








.......








.








.
Query SS confidence 


















. . . . . . .






















.




















.







Query Sequence  VHGANDPESRLPAGLLDIG. . . . . . . VSKRQIAVISKTDMPDADVAATR. KLLLETGFEEPMFELNSHDPQ. SVQQLVDY
Query Conservation 
 
                .......         

 
          .               

 

 .

  
   
Alig confidence 


















.......






















.




















.







Template Conservation                                 
    
 
                        
 




   
 
 
  
Template Sequence  VYSVTDKASFEHVDRFHQLILRVKDRESFPMILVANKVDLMHLRKVTRDQGKEMATKYNIPYIETSAKDPPLNVDKTFHD
Template Known Secondary structure  TT
TTSS



TT
STT

S
T

B
SSS
BS
Template Predicted Secondary structure 









































Template SS confidence 















































































   91........100.........110.........120.........130.........140.........150.........160.........170
 
   142.......
Predicted Secondary structure 
Query SS confidence 







Query Sequence  LASLTKQE
Query Conservation 
       
Alig confidence 







Template Conservation 
   
  
Template Sequence  LVRVIRQQ
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 







   171.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions