Return to main results Retrieve Phyre Job Id

Job DescriptionP76556
Confidence99.78%DateThu Jan 5 12:24:35 GMT 2012
Rank81Aligned Residues157
% Identity16%Templated1vg8a_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases G proteins
Resolution1.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30...... ...40.........50.........60.........70...
Predicted Secondary structure 
















.........








Query SS confidence 

































. . . . . . . . .




































Query Sequence  RIAFVGSVGAGKTTLFNALQGNYTLARKTQAVEF. . . . . . . . . NDKGDIDTPGEYFNHPRWYHALITTLQDVDMLIYVHG
Query Conservation 

 


    






 
               .........                             
 

 
 
Alig confidence 

































.........




































Template Conservation 

 


   






  
           
                                                 
Template Sequence  KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFD
Template Known Secondary structure 

TTSSS


SS




SSSS

SSGGGS
S

GGGTT
S
Template Predicted Secondary structure 


















































Template SS confidence 















































































   1010.........1020.........1030.........1040.........1050.........1060.........1070.........1080.........
 
   74.....80......... 90.........100.........110...... ...120.........130.........140..
Predicted Secondary structure 







..........








.









Query SS confidence 















. . . . . . . . . .


























.

























Query Sequence  ANDPESRLPAGLLDIG. . . . . . . . . . VSKRQIAVISKTDMPDADVAATRKLLL. ETGFEEPMFELNSHDPQSVQQLVDYL
Query Conservation                  ..........         

 
              .           

 

 

  
   
Alig confidence 















..........


























.

























Template Conservation                                  

 

 
                        
 


 
 

 


  
Template Sequence  VTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTI
Template Known Secondary structure  TT
T

SSGGGS

TTSS


S
TTS


BTTTTBS
Template Predicted Secondary structure 



























Template SS confidence 















































































   1090.........1100.........1110.........1120.........1130.........1140.........1150.........1160.........
 
   143......150.........
Predicted Secondary structure 




Query SS confidence 
















Query Sequence  ASLTKQEEAGEKTHHSE
Query Conservation                   
Alig confidence 
















Template Conservation      
            
Template Sequence  ARNALKQETEVELYNEF
Template Known Secondary structure  S
Template Predicted Secondary structure 


Template SS confidence 
















   1170.........1180......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions