Return to main results Retrieve Phyre Job Id

Job DescriptionP76556
Confidence99.78%DateThu Jan 5 12:24:35 GMT 2012
Rank87Aligned Residues146
% Identity18%Templated1upta_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases G proteins
Resolution1.7

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20...... ...30.........40.........50.........60.........70........
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Query Sequence  RIAFVGSVGAGKTTLFNALQGNYT. . . . LARKTQAVEFNDKGDIDTPGEYFNHPRWYHALITTLQDVDMLIYVHGANDPE
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Template Sequence  RILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTYKNLKFQVWDLGGLTSIRPYWRCYYSNTDAVIYVVDSCDRD
Template Known Secondary structure 
STTSSSS






SSTT


GGGGGGGGGG
TT
STT

T
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   1920.........30.........40.........50.........60.........70.........80.........90........
 
   7980......... 90.........100.........110...... ...120.........130.........140.......
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Query Sequence  SRLPAGLLDIG. . . . . . . VSKRQIAVISKTDMPDADVAATRKLLL. . . . ETGFEEPMFELNSHDPQSVQQLVDYLASLTK
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Template Conservation                              
 
                           
 




 

 

   
   
 
Template Sequence  RIGISKSELVAXLEEEELRKAILVVFANKQDXEQAXTSSEXANSLGLPALKDRKWQIFKTSATKGTGLDEAXEWLVETLK
Template Known Secondary structure  TT
GGGTT

TTSTT


TGGG
TTS


TTT
TT
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   99100.........110.........120.........130.........140.........150.........160.........170........
 
   148
Predicted Secondary structure 
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Query Sequence  Q
Query Conservation   
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Template Conservation   
Template Sequence  S
Template Known Secondary structure  T
Template Predicted Secondary structure 
Template SS confidence 
   179
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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