Return to main results Retrieve Phyre Job Id

Job DescriptionP76556
Confidence99.80%DateThu Jan 5 12:24:35 GMT 2012
Rank56Aligned Residues146
% Identity16%Templated1ds6a_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases G proteins
Resolution2.35

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1. .......10.........20.........30.... .....40.........50.........60.........70
Predicted Secondary structure 
..














........









Query SS confidence 

. .































. . . . . . . .



































Query Sequence  MK. . RIAFVGSVGAGKTTLFNALQGNYTLARKTQAV. . . . . . . . EFNDKGDIDTPGEYFNHPRWYHALITTLQDVDMLIY
Query Conservation 
 ..

 


    






 
             ........                               
 

 
Alig confidence 

..































........



































Template Conservation 
   





   






  
           
                                             
Template Sequence  MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDSKPVNLGLWDTAGQEDYDRLRPLSYPQTDVFLI
Template Known Secondary structure 

TTSSSS


S


SS


SSS





GGGTTTGGGG
TT
S
Template Predicted Secondary structure 









































Template SS confidence 















































































   1........10.........20.........30.........40.........50.........60.........70.........80
 
   71........ 80.........90.........100.........110.. .......120.........130
Predicted Secondary structure 






......










..............





Query SS confidence 








. . . . . .
































. . . . . . . . . . . . . .

















Query Sequence  VHGANDPES. . . . . . RLPAGLLDIGVSKRQIAVISKTDMPDADVAATR. . . . . . . . . . . . . . KLLLETGFEEPMFELNSH
Query Conservation 
 
      ......                   

 
          ..............               

 
Alig confidence 








......
































..............

















Template Conservation                               
     
 
                                     
 


Template Sequence  CFSLVSPASYENVRAKWFPEVRHHCPSTPIILVGTKLDLRDDKDTIEKLKEKKLAPITYPQGLALAKEIDSVKYLECSAL
Template Known Secondary structure  TT
T
TTS

GGGTT
TT




TT
S

TT
Template Predicted Secondary structure 

































Template SS confidence 















































































   81........90.........100.........110.........120.........130.........140.........150.........160
 
   131........140......
Predicted Secondary structure 



Query SS confidence 















Query Sequence  DPQSVQQLVDYLASLT
Query Conservation 

 

  
   
    
Alig confidence 















Template Conservation 

 

 
 
  
   
Template Sequence  TQRGLKTVFDEAIRAV
Template Known Secondary structure  T
TT
Template Predicted Secondary structure 



Template SS confidence 















   161........170......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions