Return to main results Retrieve Phyre Job Id

Job DescriptionP76556
Confidence99.89%DateThu Jan 5 12:24:35 GMT 2012
Rank6Aligned Residues150
% Identity16%Templatec3qq5A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:small gtp-binding protein; PDBTitle: crystal structure of the [fefe]-hydrogenase maturation protein hydf
Resolution2.99 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50 .........60.........70.......
Predicted Secondary structure 























...






Query SS confidence 

















































. . .


























Query Sequence  MKRIAFVGSVGAGKTTLFNALQGNYTLARKTQAVEFNDKGDIDTPGEYFN. . . HPRWYHALITTLQDVDMLIYVHGANDP
Query Conservation 
 

 


    






 
                             ...               
 

 
 
    
Alig confidence 

















































...


























Template Conservation 
  
 


  














   
 


     
 





  
   
      

   
   



 
 
    
Template Sequence  RRYIVVAGRRNVGKSSFMNALVGTDPVYKSMELHPIGPVTLVDTPGLDDVGELGRLRVEKARRVFYRADCGILVTDSAPT
Template Known Secondary structure 

S
STTTTTTTTSS





TTT
SSTT


TT



TS
S
SSS

Template Predicted Secondary structure 





























Template SS confidence 















































































   910.........20.........30.........40.........50.........60.........70.........80........
 
   78.80.........90.........100.........110.........120.........130.........140.........150.
Predicted Secondary structure 






















Query SS confidence 









































































Query Sequence  ESRLPAGLLDIGVSKRQIAVISKTDMPDADVAATRKLLLETGFEEPMFELNSHDPQSVQQLVDYLASLTKQEEA
Query Conservation                       

 
                         

 

 

  
   
         
Alig confidence 


































.





































Template Conservation      


  

   








 

     
   .          

 





 




 
 
   
     
Template Sequence  PYEDDVVNLFKEMEIPFVVVVNKIDVLGEKAEELK. GLYESRYEAKVLLVSALQKKGFDDIGKTISEILPGDEE
Template Known Secondary structure  TT





TTTT


T.SS

TT





SS

TTSTTTS




Template Predicted Secondary structure 











.













Template SS confidence 









































































   102.......110.........120.........130...... ...140.........150.........160.........170....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions