Return to main results Retrieve Phyre Job Id

Job DescriptionP76556
Confidence99.61%DateThu Jan 5 12:24:35 GMT 2012
Rank211Aligned Residues146
% Identity18%Templatec3p1jC_
PDB info PDB header:hydrolaseChain: C: PDB Molecule:gtpase imap family member 2; PDBTitle: crystal structure of human gtpase imap family member 2 in the2 nucleotide-free state
Resolution2.58 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20....... ..30.........40.........50.........60.........70.........
Predicted Secondary structure 










...




















Query SS confidence 
























. . .



















































Query Sequence  RIAFVGSVGAGKTTLFNALQGNYTL. . . ARKTQAVEFNDKGDIDTPGEYFNHPRWYHALITTLQDVDMLIYVHGANDPES
Query Conservation 

 


    






 
      ...                                      
 

 
 
      
Alig confidence 
























...



















































Template Conservation 

 
 
    




 
 
 
             






             
            


 
      
 
Template Sequence  RIILVGKTGTGKSAAGNSILRTCSKSQGSWREIVIIDTPDMFSWKDHCEALYKEVQRCYLLSAPGPHVLLLVTQLGRYTS
Template Known Secondary structure 

TTS







GGGGSS


TT

STTB

Template Predicted Secondary structure 

































Template SS confidence 















































































   24.....30.........40.........50.........60.........70.........80.........90.........100...
 
   80........ .90.........100... ......110.........120..... ....130.........140...
Predicted Secondary structure 

......







.......




...





Query SS confidence 








. . . . . .














. . . . . . .





















. . .

















Query Sequence  RLPAGLLDI. . . . . . GVSKRQIAVISKTDM. . . . . . . PDADVAATRKLLLETGFEEPMF. . . ELNSHDPQSVQQLVDYLA
Query Conservation           ......          

 
 .......                      ...  

 

 

  
   
 
Alig confidence 








......














.......





















...

















Template Conservation          
            


 

 
               
         
   
            
 



 
 
Template Sequence  QDQQAAQRVKEIFGEDAMGHTIVLFTHKNGGSLMDYMHDSDNKALSKLVAACGGRICAFNNRAEGSNQDDQVKELMDCIE
Template Known Secondary structure 
GGGGGG




TTT
TT

T
Template Predicted Secondary structure 


















Template SS confidence 















































































   121........130.........140.........150.........160.........170.........180.........190.........200
 
   144....
Predicted Secondary structure 
Query SS confidence 




Query Sequence  SLTKQ
Query Conservation       
Alig confidence 




Template Conservation      
Template Sequence  DLLME
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 




   204....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions