Job Description P76556 Confidence 99.58% Date Thu Jan 5 12:24:35 GMT 2012 Rank 217 Aligned Residues 145 % Identity 24% Template c3mmpC_ PDB info PDB header:transferase Chain: C: PDB Molecule:elongation factor tu 2, elongation factor ts; PDBTitle: structure of the qb replicase, an rna-dependent rna polymerase2 consisting of viral and host proteins Resolution 2.50 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.				.
Predicted Secondary structure																								.																																																						.	.	.
Query SS confidence																								.																																																						.	.	.
Query Sequence		R	I	A	F	V	G	S	V	G	A	G	K	T	T	L	F	N	A	L	Q	G	N	.	Y	T	L	A	R	K	T	Q	A	V	E	F	N	D	K	G	D	I	D	T	P	G	E	Y	F	N	H	P	R	W	Y	H	A	L	I	T	T	L	Q	D	V	D	M	L	I	Y	V	H	G	A	N	D	P	.	.	.	E
Query Conservation																								.																																																						.	.	.
Alig confidence																								.																																																						.	.	.
Template Conservation
Template Sequence		N	V	G	T	I	G	H	V	D	H	G	K	T	T	L	T	A	A	I	T	T	V	L	A	K	T	Y	G	G	T	S	H	V	E	Y	D	T	P	T	R	H	Y	A	H	V	D	C	P	G	H	A	D	Y	V	K	N	M	I	T	G	A	A	Q	M	D	G	A	I	L	V	V	A	A	T	D	G	P	M	P	Q
Template Known Secondary structure									T	T	S																												S	S																					T	S				S								T	T	T				T	T
Template Predicted Secondary structure
Template SS confidence
		1013	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.						.	.	110	.	.	.	.	.	.	.	.	.	120	.					.	.	.	.	.	.	.	.	130	.	.									.	.	.	.	.	.	.	140	.
Predicted Secondary structure																															.	.	.	.	.															.	.	.	.												.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.															.	.	.	.												.	.	.	.	.	.	.	.
Query Sequence		S	R	L	P	A	G	L	L	D	I	G	V	S	K	R	Q	I	A	V	I	S	K	T	D	M	P	D	A	D	.	.	.	.	.	V	A	A	T	R	K	L	L	L	E	T	G	F	E	.	.	.	.	E	P	M	F	E	L	N	S	H	D	P	.	.	.	.	.	.	.	.	Q	S	V	Q	Q	L	V	D	Y
Query Conservation																															.	.	.	.	.															.	.	.	.												.	.	.	.	.	.	.	.
Alig confidence																															.	.	.	.	.															.	.	.	.												.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	R	E	H	I	L	L	G	R	Q	V	G	V	P	Y	I	I	V	F	L	N	K	C	D	M	V	D	D	E	E	L	L	E	L	V	E	M	E	V	R	E	L	L	S	Q	Y	D	F	P	G	D	D	T	P	I	V	R	G	S	A	L	K	A	L	E	G	D	A	E	W	E	A	K	I	L	E	L	A	G	F
Template Known Secondary structure												T	T		S									G	G	G																					T	T	S		G	G	G														T
Template Predicted Secondary structure
Template SS confidence
		1115	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.
		142	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	S	L	T	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	D	S	Y	I	P
Template Known Secondary structure						S
Template Predicted Secondary structure
Template SS confidence
		1195	.	.	.	.	1200

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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