Job Description P76556 Confidence 99.33% Date Thu Jan 5 12:24:35 GMT 2012 Rank 242 Aligned Residues 117 % Identity 13% Template c3mcaA_ PDB info PDB header:translation regulation/hydrolase Chain: A: PDB Molecule:elongation factor 1 alpha-like protein; PDBTitle: structure of the dom34-hbs1 complex and implications for its role in2 no-go decay Resolution 2.74 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.			.	80
Predicted Secondary structure																																																																														.	.
Query SS confidence																																																																														.	.
Query Sequence		R	I	A	F	V	G	S	V	G	A	G	K	T	T	L	F	N	A	L	Q	G	N	Y	T	L	A	R	K	T	Q	A	V	E	F	N	D	K	G	D	I	D	T	P	G	E	Y	F	N	H	P	R	W	Y	H	A	L	I	T	T	L	Q	D	V	D	M	L	I	Y	V	H	G	A	N	D	P	E	.	.	S	R
Query Conservation																																																																														.	.
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	L	V	V	T	G	H	V	D	S	G	K	S	T	M	L	G	R	I	M	F	E	L	G	E	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	G	D	A	P	G	H	R	D	F	I	S	G	M	I	A	A	V	L	V	V	D	S	S	Q	N	N	F	E	R	G	F	L	E	N	G	Q	T
Template Known Secondary structure									S	S	S	T																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						S	S	S											S									S	S	T	T	S		S		S	S
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.																	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.		.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.												.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure															.																									.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.																									.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	P	A	G	L	L	D	I	G	V	S	K	R	.	Q	I	A	V	I	S	K	T	D	M	P	D	A	D	V	A	A	T	R	K	L	L	L	E	.	.	.	.	.	.	.	.	.	.	.	T	G	F	E	E	P	M	F	E	L	N	S	H	D	P	Q	S	V
Query Conservation															.																									.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.																									.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	E	H	A	Y	L	L	R	A	L	G	I	S	E	I	V	V	S	V	N	K	L	D	L	M	S	W	S	E	D	R	F	Q	E	I	K	N	I	V	S	D	F	L	I	K	M	V	G	F	K	T	S	N	V	H	F	V	P	I	S	A	I	S	G	T	N	L
Template Known Secondary structure											S	S											G	G	G	G	T	T																	T	T	T	S				G	G	G								S	S	S		S	S	S
Template Predicted Secondary structure
Template SS confidence
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions