Job Description P76556 Confidence 99.54% Date Thu Jan 5 12:24:35 GMT 2012 Rank 225 Aligned Residues 147 % Identity 15% Template c3lxwA_ PDB info PDB header:immune system Chain: A: PDB Molecule:gtpase imap family member 1; PDBTitle: crystal structure of human gtpase imap family member 1 Resolution 2.21 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50													.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	R	I	A	F	V	G	S	V	G	A	G	K	T	T	L	F	N	A	L	Q	G	N	Y	T	L	A	R	K	T	Q	A	V	E	F	N	D	K	G	D	I	D	T	P	G	E	Y	F	N	.	.	.	.	.	.	.	.	.	.	.	.	H	P	R	W	Y	H	A	L	I	T	T	L	Q	D	V	D	M	L	I
Query Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																			.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	R	L	I	L	V	G	R	T	G	A	G	K	S	A	T	G	N	S	I	L	G	Q	R	R	F	T	R	A	C	T	T	G	S	R	R	W	D	K	C	H	V	E	V	V	D	T	P	D	I	F	S	S	Q	V	S	K	T	D	P	G	C	E	E	R	G	H	C	Y	L	L	S	A	P	G	P	H	A	L	L
Template Known Secondary structure								S	S	T	T	S	S										T	S						S									T	T										S		S	S	T	T					S	T	T	S											T	T			S
Template Predicted Secondary structure
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.							.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110									.	.	.	.	.	.	.	.	.	120	.	.	.	.	.						.	.	.	.	130
Predicted Secondary structure																					.	.	.	.	.	.																							.	.	.	.	.	.	.	.																.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.																							.	.	.	.	.	.	.	.																.	.	.	.	.
Query Sequence		Y	V	H	G	A	N	D	P	E	S	R	L	P	A	G	L	L	D	I	.	.	.	.	.	.	G	V	S	K	R	Q	I	A	V	I	S	K	T	D	M	P	D	A	D	V	A	A	.	.	.	.	.	.	.	.	T	R	K	L	L	L	E	T	G	F	E	E	P	M	F	.	.	.	.	.	E	L	N	S	H
Query Conservation																					.	.	.	.	.	.																							.	.	.	.	.	.	.	.																.	.	.	.	.
Alig confidence																					.	.	.	.	.	.																							.	.	.	.	.	.	.	.																.	.	.	.	.
Template Conservation
Template Sequence		L	V	T	Q	L	G	R	F	T	A	Q	D	Q	Q	A	V	R	Q	V	R	D	M	F	G	E	D	V	L	K	W	M	V	I	V	F	T	R	K	E	D	L	A	G	G	S	L	H	D	Y	V	S	N	T	E	N	R	A	L	R	E	L	V	A	E	C	G	G	R	V	C	A	F	D	N	R	A	T	G	R	E
Template Known Secondary structure						T	T	B																		G	G	G	G	G	G								G	G	G	G	T	T																						T	T	T							T	T
Template Predicted Secondary structure
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	P	Q	S	V	Q	Q	L	V	D	Y	L	A	S	L	T	K	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	E	A	Q	V	E	Q	L	L	G	M	V	E	G	L	V	L	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions