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Job DescriptionP76556
Confidence99.86%DateThu Jan 5 12:24:35 GMT 2012
Rank16Aligned Residues145
% Identity17%Templatec3lvrE_
PDB info PDB header:protein transportChain: E: PDB Molecule:arf-gap with sh3 domain, ank repeat and ph domain- PDBTitle: the crystal structure of asap3 in complex with arf6 in transition2 state soaked with calcium
Resolution3.38 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20...... ...30.........40.. .......50.........60.........70........
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Query Sequence  RIAFVGSVGAGKTTLFNALQGNYT. LARKTQAVEFNDKGDI. . . DTPGEYFNHPRWYHALITTLQDVDMLIYVHGANDPE
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Template Sequence  RILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRD
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GGGSTTGGGGTTT

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   15....20.........30.........40.........50.........60.........70.........80.........90....
 
   7980......... 90.........100.........110.........120 .........130.........140.......
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Query Sequence  SRLPAGLLDIG. . . . . . . VSKRQIAVISKTDMPDADVAATRKLLLETGF. . . . EEPMFELNSHDPQSVQQLVDYLASLTK
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Template Sequence  RIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLYEGLTWLTSNYK
Template Known Secondary structure  TTSTT
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   95....100.........110.........120.........130.........140.........150.........160.........170....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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