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Job DescriptionP76556
Confidence99.65%DateThu Jan 5 12:24:35 GMT 2012
Rank200Aligned Residues139
% Identity13%Templatec3dpuA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:rab family protein; PDBTitle: roccor domain tandem of rab family protein (roco)
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20...... ...30.........40.........50.........60.........70......
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Query Sequence  RIAFVGSVGAGKTTLFNALQGNYT. . . . . . LARKTQAVEFNDKGDIDTPGEYFNHPRWYHALITTLQDVDMLIYVHGAND
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Template Sequence  KVHLIGDGMAGKTSLLKQLIGGLNVVTKQAPNIKGLENDDELKECLFHFWDFGGQEIMHASHQFFMTRSSVYMLLLDSRT
Template Known Secondary structure  SSS
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GGGSGGGTT
STTTT



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   454.....460.........470.........480.........490.........500.........510.........520.........530...
 
   77..80... ......90.........100...... ...110.........120.........130.........140..
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Query Sequence  PESRLPA. . GLLDIGVSKRQIAVISKTDMPDA. DVAATRKLLLETGFEEPMFELNSHDPQSVQQLVDYL
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Template Sequence  DSNKHYWLRHIEKYGGKSPVIVVMNKIDENPSYNIEQKKINERFPAIENRFHRISCVES. IAKSLKSAV
Template Known Secondary structure  GGGSSS



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   545....550.........560.........570.........580.........590.........600... ......610..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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