Job Description P76556 Confidence 99.32% Date Thu Jan 5 12:24:35 GMT 2012 Rank 243 Aligned Residues 118 % Identity 14% Template c2yc2D_ PDB info PDB header:transport protein Chain: D: PDB Molecule:small rab-related gtpase; PDBTitle: intraflagellar transport complex 25-27 from chlamydomonas Resolution 2.59 Å

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.										.	.	.	.	.	.	.	.	100
Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.	.	.	.	.
Query Sequence		K	T	Q	A	V	E	F	N	D	K	G	D	I	D	T	P	G	E	Y	F	N	H	P	R	W	Y	H	A	L	I	T	T	L	Q	D	V	D	M	L	I	Y	V	H	G	A	N	D	P	E	S	R	L	P	A	G	L	L	D	I	G	V	S	.	.	.	.	.	.	.	.	.	K	R	Q	I	A	V	I	S	K
Query Conservation																																																																.	.	.	.	.	.	.	.	.
Alig confidence																																																																.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	P	V	T	I	P	D	T	T	V	S	V	E	L	F	L	L	D	T	A	G	S	D	L	Y	K	E	Q	I	S	Q	Y	W	N	G	V	Y	Y	A	I	L	V	F	D	V	S	S	M	E	S	F	E	S	C	K	A	W	F	E	L	L	K	S	A	R	P	D	R	E	R	P	L	R	A	V	L	V	A	N	K
Template Known Secondary structure							T	T	S	S										T	T	T	T								S	T	T													T	T																				S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.			.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																																		.	.
Query SS confidence																																		.	.
Query Sequence		T	D	M	P	D	A	D	V	A	A	T	R	K	L	L	L	E	T	G	F	E	E	P	M	F	E	L	N	S	H	D	P	.	.	Q	S	V	Q	Q	L	V	D	Y	L	A	S	L	T	K	Q	E	E	A	G
Query Conservation																																		.	.
Alig confidence				.	.	.	.	.																										.	.
Template Conservation				.	.	.	.	.
Template Sequence		T	Q	.	.	.	.	.	V	R	L	D	M	A	Q	D	W	A	T	T	N	T	L	D	F	F	D	V	S	A	A	D	A	P	F	L	S	I	A	T	T	F	Y	R	N	Y	E	D	K	V	A	A	F	Q	D
Template Known Secondary structure				.	.	.	.	.														T
Template Predicted Secondary structure				.	.	.	.	.
Template SS confidence
		138	.						140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions