Job Description P76556 Confidence 99.50% Date Thu Jan 5 12:24:35 GMT 2012 Rank 229 Aligned Residues 146 % Identity 21% Template c2xtnA_ PDB info PDB header:immune system Chain: A: PDB Molecule:gtpase imap family member 2; PDBTitle: crystal structure of gtp-bound human gimap2, amino acid2 residues 1-234 Resolution 1.90 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.														.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.								.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.
Query Sequence		R	I	A	F	V	G	S	V	G	A	G	K	T	T	L	F	N	A	L	Q	G	N	Y	T	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	R	K	T	Q	A	V	E	F	N	D	K	G	D	I	D	T	P	G	.	.	.	.	.	.	.	E	Y	F	N	H	P	R	W	Y	H	A	L	I	T	T	L
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	I	I	L	V	G	K	T	G	T	G	K	S	A	A	G	N	S	I	L	R	K	Q	A	F	E	S	K	L	G	S	Q	T	L	T	K	T	C	S	K	S	Q	G	S	W	G	N	R	E	I	V	I	I	D	T	P	D	M	F	S	W	K	D	H	C	E	A	L	Y	K	E	V	Q	R	C	Y	L	L	S	A
Template Known Secondary structure							S	S	T	T	S	S										T	S			S						S	S					S									T	T										S	T	T	S	S	S				T	T													T
Template Predicted Secondary structure
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.							.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110									.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.																							.	.	.	.	.	.	.	.																.	.	.
Query SS confidence																												.	.	.	.	.	.																							.	.	.	.	.	.	.	.																.	.	.
Query Sequence		Q	D	V	D	M	L	I	Y	V	H	G	A	N	D	P	E	S	R	L	P	A	G	L	L	D	I	.	.	.	.	.	.	G	V	S	K	R	Q	I	A	V	I	S	K	T	D	M	P	D	A	D	V	A	A	.	.	.	.	.	.	.	.	T	R	K	L	L	L	E	T	G	F	E	E	P	M	F	.	.	.
Query Conservation																												.	.	.	.	.	.																							.	.	.	.	.	.	.	.																.	.	.
Alig confidence																												.	.	.	.	.	.																							.	.	.	.	.	.	.	.																.	.	.
Template Conservation
Template Sequence		P	G	P	H	V	L	L	L	V	T	Q	L	G	R	Y	T	S	Q	D	Q	Q	A	A	Q	R	V	K	E	I	F	G	E	D	A	M	G	H	T	I	V	L	F	T	H	K	E	D	L	G	S	L	M	D	Y	M	H	D	S	D	N	K	A	L	S	K	L	V	A	A	C	G	G	R	I	C	A	F	N	N	R
Template Known Secondary structure		T			S								T	T																			T	T	G	G	G	G								G	G	G																							T	T	T							T	T
Template Predicted Secondary structure
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	N	S	H	D	P	Q	S	V	Q	Q	L	V	D	Y	L	A	S	L	T	K	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	E	G	S	N	Q	D	D	Q	V	K	E	L	M	D	C	I	E	D	L	L	M	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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