Return to main results Retrieve Phyre Job Id

Job DescriptionP76556
Confidence99.82%DateThu Jan 5 12:24:35 GMT 2012
Rank39Aligned Residues146
% Identity18%Templatec2wjjB_
PDB info PDB header:metal transportChain: B: PDB Molecule:ferrous iron transport protein b homolog; PDBTitle: structure and function of the feob g-domain from2 methanococcus jannaschii
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40...... ...50.........60.......
Predicted Secondary structure 






















...............

Query SS confidence 











































. . . . . . . . . . . . . . .




















Query Sequence  RIAFVGSVGAGKTTLFNALQGNYTLARKTQAVEFNDKGDIDTPG. . . . . . . . . . . . . . . EYFNHPRWYHALITTLQDVDM
Query Conservation 

 


    






 
                         ...............                   
 
Alig confidence 











































...............




















Template Conservation 

 


    





  
                                
  
                         
Template Sequence  EIALIGNPNVGKSTIFNALTGENVYIGNWPGVTVEKKEGEFEYNGEKFKVVDLPGVYSLTANSIDEIIARDYIINEKPDL
Template Known Secondary structure 
STTSSS
S

TTS

TT



S
SSSSS

S
Template Predicted Secondary structure 
































Template SS confidence 















































































   5....10.........20.........30.........40.........50.........60.........70.........80....
 
   68.70.........80.........90.........100.........110.........120.........130.........140.......
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  LIYVHGANDPESRLPAGLLDIGVSKRQIAVISKTDMPDADVAATRKLLLETGFEEPMFELNSHDPQSVQQLVDYLASLTK
Query Conservation 

 
 
                         

 
                         

 

 

  
   
     
Alig confidence 















































































Template Conservation                                    
                         

 

 

 

   
   
 
Template Sequence  VVNIVDATALERNLYLTLQLXEXGANLLLALNKXDLAKSLGIEIDVDKLEKILGVKVVPLSAAKKXGIEELKKAISIAVK
Template Known Secondary structure  GGGTT


TT



S
S


TTTTTTTT
Template Predicted Secondary structure 



































Template SS confidence 















































































   85....90.........100.........110.........120.........130.........140.........150.........160....
 
   148
Predicted Secondary structure 
Query SS confidence 
Query Sequence  Q
Query Conservation   
Alig confidence 
Template Conservation 
Template Sequence  D
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
   165
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions