Job Description P76556 Confidence 99.86% Date Thu Jan 5 12:24:35 GMT 2012 Rank 14 Aligned Residues 144 % Identity 17% Template c2rexD_ PDB info PDB header:signaling protein/lipoprotein Chain: D: PDB Molecule:rho-related gtp-binding protein rho6; PDBTitle: crystal structure of the effector domain of plxnb1 bound with rnd12 gtpase Resolution 2.30 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.									.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.
Query Sequence		R	I	A	F	V	G	S	V	G	A	G	K	T	T	L	F	N	A	L	Q	G	N	Y	T	L	A	R	K	T	Q	A	V	E	F	N	D	K	G	D	I	.	.	.	.	.	.	.	.	D	T	P	G	E	Y	F	N	H	P	R	W	Y	H	A	L	I	T	T	L	Q	D	V	D	M	L	I	Y	V	H	G	A
Query Conservation																																										.	.	.	.	.	.	.	.
Alig confidence																																										.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	L	V	L	V	G	D	V	Q	C	G	K	T	A	M	L	Q	V	L	A	K	D	C	Y	P	E	T	Y	V	P	T	V	F	E	N	Y	T	A	C	L	E	T	E	E	Q	R	V	E	L	S	L	W	D	T	S	G	S	P	Y	Y	D	N	V	R	P	L	C	Y	S	D	S	D	A	V	L	L	C	F	D	I
Template Known Secondary structure								S	T	T	S	S											S					S					S											S	S													S	G	G	G	T	T	T	G	G	G	G	G	T	T		S								T
Template Predicted Secondary structure
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.					90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110															.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.		.	.
Predicted Secondary structure																	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Query SS confidence																	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Query Sequence		N	D	P	E	S	R	L	P	A	G	L	L	D	I	G	.	.	.	.	V	S	K	R	Q	I	A	V	I	S	K	T	D	M	P	D	A	D	V	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	R	K	L	L	L	E	T	G	F	E	E	P	M	F	E	L	N	S	H	D	P	Q	.	S	V
Query Conservation																	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Alig confidence																	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template Conservation
Template Sequence		S	R	P	E	T	V	A	L	K	K	W	R	T	E	I	L	D	Y	C	P	S	T	R	V	L	L	I	G	C	K	T	D	L	R	T	D	L	S	T	L	M	E	L	S	H	Q	K	Q	A	P	I	S	Y	E	Q	G	C	A	I	A	K	Q	L	G	A	E	I	Y	L	E	G	S	A	F	T	S	E	K	S	I
Template Known Secondary structure		T		T	T	T															T	T	S									G	G	G	G	G											T	T																T	T		S							T	T	T
Template Predicted Secondary structure
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		136	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	L	V	D	Y	L	A	S	L	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	S	I	F	R	T	A	S	M	L	C
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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