Return to main results Retrieve Phyre Job Id

Job DescriptionP76556
Confidence97.13%DateThu Jan 5 12:24:35 GMT 2012
Rank339Aligned Residues133
% Identity15%Templatec2qz4A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:paraplegin; PDBTitle: human paraplegin, aaa domain in complex with adp
Resolution2.22 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
Predicted Secondary structure 

































Query SS confidence 















































































Query Sequence  KRIAFVGSVGAGKTTLFNALQGNYTLARKTQAVEFNDKGDIDTPGEYFNHPRWYHALITTLQDVDMLIYVHGANDPESRL
Query Conservation   

 


    






 
                                            
 

 
 
        
Alig confidence 





















.....




















































Template Conservation    


 

 




 

  

 .....                         
             

  
         
Template Sequence  KGALLLGPPGCGKTLLAKAVAT. . . . . EAQVPFLAMAGAEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIEQTLNQL
Template Known Secondary structure 
S
TTSS.....T

TTTTSSSSTTT
S


Template Predicted Secondary structure 






.....




















Template SS confidence 















































































   343......350.........360.... .....370.........380.........390.........400.........410.......
 
   82.......90.........100.........110.........120.........130.........140....
Predicted Secondary structure 


















Query SS confidence 






























































Query Sequence  PAGLLDIGVSKRQIAVISKTDMPDADVAATRKLLLETGFEEPMFELNSHDPQSVQQLVDYLAS
Query Conservation                   

 
                         

 

 

  
   
  
Alig confidence 































.....

























Template Conservation              
  
  

            .....      
    
    
  
    
 
Template Sequence  LVEMDGMGTTDHVIVLASTNRADILDGALMRP. . . . . GRLDRHVFIDLPTLQERREIFEQHLK
Template Known Secondary structure  T

TT

S
GGGGGSGGGST.....TS



S

Template Predicted Secondary structure 


















.....








Template SS confidence 






























































   437..440.........450.........460........ .470.........480.........490....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions